Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35700 | Prdx1 | Peroxiredoxin-1 (EC 1.11.1.24) (Macrophage 23 … | Mus musculus (Mouse) | 199 aa |
Protein Details: P35700 (Prdx1)
Protein Information
| Accession | P35700 |
|---|---|
| Protein Names | Peroxiredoxin-1 (EC 1.11.1.24) (Macrophage 23 kDa stress protein) (Osteoblast-specific factor 3) (OSF-3) (Thioredoxin peroxidase 2) (Thioredoxin-dependent peroxide reductase 2) (Thioredoxin-dependent peroxiredoxin 1) |
| Gene Symbol | Prdx1 |
| Organism | Mus musculus (Mouse) |
| Length | 199 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSGNAKIGY11PAPNFKATAV21MPDGQFKDIS31LSEYKGKYVV41FFFYPLDFTF
51-10051VCPTEIIAFS61DRADEFKKLN71CQVIGASVDS81HFCHLAWINT91PKKQGGLGPM
101-150101NIPLISDPKR111TIAQDYGVLK121ADEGISFRGL131FIIDDKGILR141QITINDLPVG
151-199151RSVDEIIRLV161QAFQFTDKHG171EVCPAGWKPG181SDTIKPDVNK191SKEYFSKQK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 52 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.39
|
|
| 71 | SWISSPALM DBPTM CYSMODDB | AhpC/TSA family |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.83
Deep-Palm: 0.90
|
| 83 | SWISSPALM DBPTM CYSMODDB | AhpC/TSA family |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.50
|
| 173 | SWISSPALM DBPTM CYSMODDB | C-terminal domain of 1-Cys peroxiredoxin |
Brain
(31311849)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.71
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.140
6/6 (100.0%)
5
Brain
Specificity: 0.116
5/5 (100.0%)
2
Testis
Specificity: 0.047
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
30
Brain tissue (Mass)
Specificity: 0.698
30/56 (53.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.