Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35802 | Gpm6a | Neuronal membrane glycoprotein M6-a (M6a) | Mus musculus (Mouse) | 278 aa |
Protein Details: P35802 (Gpm6a)
Protein Information
| Accession | P35802 |
|---|---|
| Protein Names | Neuronal membrane glycoprotein M6-a (M6a) |
| Gene Symbol | Gpm6a |
| Organism | Mus musculus (Mouse) |
| Length | 278 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEENMEEGQT11QKGCFECCIK21CLGGIPYASL31IATILLYAGV41ALFCGCGHEA
51-10051LSGTVNILQT61YFELARTAGD71TLDVFTMIDI81FKYVIYGIAA91AFFVYGILLM
101-150101VEGFFTTGAI111KDLYGDFKIT121TCGRCVSAWF131IMLTYLFMLA141WLGVTAFTSL
151-200151PVYMYFNVWT161ICRNTTLVEG171ANLCLDLRQF181GIVTIGEEKK191ICTASENFLR
201-250201MCESTELNMT211FHLFIVALAG221AGAAVIAMVH231YLMVLSANWA241YVKDACRMQK
251-278251YEDIKSKEEQ261ELHDIHSTRS271KERLNAYT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | SWISSPALM DBPTM CYSMODDB | Myelin proteolipid protein (PLP or lipophilin) |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.86
Deep-Palm: 0.15
|
| 17 | SWISSPALM DBPTM CYSMODDB | Myelin proteolipid protein (PLP or lipophilin) Myelin proteolipid protein PLP |
Brain
(34200797)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.84
Deep-Palm: 0.78
|
| 18 | SWISSPALM DBPTM CYSMODDB | Myelin proteolipid protein (PLP or lipophilin) Myelin proteolipid protein PLP |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.85
Deep-Palm: 0.76
|
| 21 | Myelin proteolipid protein PLP | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.97
|
|
| 44 | Myelin proteolipid protein PLP | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.95
|
|
| 46 | Myelin proteolipid protein PLP | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.83
|
|
| 122 | SWISSPALM DBPTM CYSMODDB | Myelin proteolipid protein (PLP or lipophilin) |
Forebrain
(28680068)
| - |
Deep-Palm: 0.74
|
| 125 | - | - | - |
Deep-Palm: 0.23
|
|
| 162 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.56
|
|
| 174 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.81
Deep-Palm: 0.94
|
|
| 192 | SWISSPALM DBPTM CYSMODDB | Myelin proteolipid protein (PLP or lipophilin) |
Liver
(28526873)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.82
Deep-Palm: 0.71
|
| 202 | - | - | - |
Deep-Palm: 0.43
|
|
| 246 | SWISSPALM | Myelin proteolipid protein (PLP or lipophilin) | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.417
5
Liver
Specificity: 0.098
5/5 (100.0%)
4
Brain
Specificity: 0.078
4/4 (100.0%)
2
Testis
Specificity: 0.039
2/2 (100.0%)
1
NSC
Specificity: 0.020
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
39
Brain tissue (Mass)
Specificity: 0.765
39/56 (69.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.