Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P35979 | Rpl12 | Large ribosomal subunit protein uL11 … | Mus musculus (Mouse) | 165 aa |
Protein Details: P35979 (Rpl12)
Protein Information
| Accession | P35979 |
|---|---|
| Protein Names | Large ribosomal subunit protein uL11 (60S ribosomal protein L12) |
| Gene Symbol | Rpl12 |
| Organism | Mus musculus (Mouse) |
| Length | 165 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29575903 29733200 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPPKFDPNEV11KVVYLRCTGG21EVGATSALAP31KIGPLGLSPK41KVGDDIAKAT
51-10051GDWKGLRITV61KLTIQNRQAQ71IEVVPSASAL81IIKALKEPPR91DRKKQKNIKH
101-150101SGNITFDEIV111NIARQMRHRS121LARELSGTIK131EILGTAQSVG141CNVDGRHPHD
151-165151IIDDINSGAV161ECPAS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L11 N-terminal domain Large ribosomal subunit protein uL11, N-terminal Large ribosomal subunit protein uL11, N-terminal domain superfamily Ribosomal protein uL11 |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.96
|
| 141 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.81
|
| 162 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.207
6/6 (100.0%)
3
Brain
Specificity: 0.103
3/3 (100.0%)
1
Raw 264.7
Specificity: 0.034
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.655
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.