Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P40240 | Cd9 | CD9 antigen (CD antigen CD9) | Mus musculus (Mouse) | 226 aa |
Protein Details: P40240 (Cd9)
Protein Information
| Accession | P40240 |
|---|---|
| Protein Names | CD9 antigen (CD antigen CD9) |
| Gene Symbol | Cd9 |
| Organism | Mus musculus (Mouse) |
| Length | 226 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 31311849 31772009 34200797 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPVKGGSKCI11KYLLFGFNFI21FWLAGIAVLA31IGLWLRFDSQ41TKSIFEQENN
51-10051HSSFYTGVYI61LIGAGALMML71VGFLGCCGAV81QESQCMLGLF91FGFLLVIFAI
101-150101EIAAAVWGYT111HKDEVIKELQ121EFYKDTYQKL131RSKDEPQRET141LKAIHMALDC
151-200151CGIAGPLEQF161ISDTCPKKQL171LESFQVKPCP181EAISEVFNNK191FHIIGAVGIG
201-226201IAVVMIFGMI211FSMILCCAIR221RSREMV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.02
|
|
| 76 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.97
|
|
| 77 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 85 | - | - | - |
Deep-Palm: 0.95
|
|
| 150 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Brain
(34200797)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.89
Deep-Palm: 0.97
|
| 151 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.81
Deep-Palm: 0.97
|
| 165 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.88
Deep-Palm: 0.92
|
| 179 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
GPS-Palm: 0.81
Deep-Palm: 0.87
|
| 216 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.04
|
|
| 217 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.286
4
Liver
Specificity: 0.114
4/4 (100.0%)
4
Raw 264.7
Specificity: 0.114
4/4 (100.0%)
3
Brain
Specificity: 0.086
3/3 (100.0%)
2
Testis
Specificity: 0.057
2/2 (100.0%)
1
NSC
Specificity: 0.029
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.905
19
Brain tissue (Mass)
Specificity: 0.543
19/56 (33.9%)
2
Liver tissue (Mass)
Specificity: 0.057
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.