Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P41002 | CCNF | Cyclin-F (F-box only protein 1) | Homo sapiens (Human) | 786 aa |
Protein Details: P41002 (CCNF)
Protein Information
| Accession | P41002 |
|---|---|
| Protein Names | Cyclin-F (F-box only protein 1) |
| Gene Symbol | CCNF |
| Organism | Homo sapiens (Human) |
| Length | 786 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGSGGVVHCR11CAKCFCYPTK21RRIRRRPRNL31TILSLPEDVL41FHILKWLSVE
51-10051DILAVRAVHS61QLKDLVDNHA71SVWACASFQE81LWPSPGNLKL91FERAAEKGNF
101-150101EAAVKLGIAY111LYNEGLSVSD121EARAEVNGLK131ASRFFSLAER141LNVGAAPFIW
151-200151LFIRPPWSVS161GSCCKAVVHE171SLRAECQLQR181THKASILHCL191GRVLSLFEDE
201-250201EKQQQAHDLF211EEAAHQGCLT221SSYLLWESDR231RTDVSDPGRC241LHSFRKLRDY
251-300251AAKGCWEAQL261SLAKACANAN271QLGLEVRASS281EIVCQLFQAS291QAVSKQQVFS
301-350301VQKGLNDTMR311YILIDWLVEV321ATMKDFTSLC331LHLTVECVDR341YLRRRLVPRY
351-400351RLQLLGIACM361VICTRFISKE371ILTIREAVWL381TDNTYKYEDL391VRMMGEIVSA
401-450401LEGKIRVPTV411VDYKEVLLTL421VPVELRTQHL431CSFLCELSLL441HTSLSAYAPA
451-500451RLAAAALLLA461RLTHGQTQPW471TTQLWDLTGF481SYEDLIPCVL491SLHKKCFHDD
501-550501APKDYRQVSL511TAVKQRFEDK521RYGEISQEEV531LSYSQLCAAL541GVTQDSPDPP
551-600551TFLSTGEIHA561FLSSPSGRRT571KRKRENSLQE581DRGSFVTTPT591AELSSQEETL
601-650601LGSFLDWSLD611CCSGYEGDQE621SEGEKEGDVT631APSGILDVTV641VYLNPEQHCC
651-700651QESSDEEACP661EDKGPQDPQA671LALDTQIPAT681PGPKPLVRTS691REPGKDVTTS
701-750701GYSSVSTASP711TSSVDGGLGA721LPQPTSVLSL731DSDSHTQPCH741HQARKSCLQC
751-786751RPPSPPESSV761PQQQVKRINL771CIHSEEEDMN781LGLVRL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.01
|
|
| 11 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.01
|
|
| 14 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.11
|
|
| 16 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.35
|
|
| 75 | - | - | - |
Deep-Palm: 0.82
|
|
| 163 | - | - | - |
Deep-Palm: 0.67
|
|
| 164 | - | - | - |
Deep-Palm: 0.67
|
|
| 176 | - | - | - |
Deep-Palm: 0.83
|
|
| 189 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 218 | - | - | - |
Deep-Palm: 0.73
|
|
| 240 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.89
|
|
| 255 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.95
|
|
| 266 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.97
|
|
| 284 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.96
|
|
| 330 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.34
|
|
| 337 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.92
|
|
| 359 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.53
|
|
| 363 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.45
|
|
| 431 | - | - | - |
Deep-Palm: 0.97
|
|
| 435 | - | - | - |
Deep-Palm: 0.97
|
|
| 488 | - | - | - |
Deep-Palm: 0.49
|
|
| 496 | - | - | - |
Deep-Palm: 0.42
|
|
| 537 | - | - | - |
Deep-Palm: 0.85
|
|
| 611 | - | - | - |
Deep-Palm: 0.86
|
|
| 612 | - | - | - |
Deep-Palm: 0.89
|
|
| 649 | - | - | - |
Deep-Palm: 0.17
|
|
| 650 | - | - | - |
Deep-Palm: 0.11
|
|
| 659 | - | - | - |
Deep-Palm: 0.42
|
|
| 739 | - | - | - |
Deep-Palm: 0.18
|
|
| 747 | - | - | - |
Deep-Palm: 0.08
|
|
| 750 | - | - | - |
Deep-Palm: 0.09
|
|
| 771 | - | - | - |
Deep-Palm: 0.76
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 75 | C → S | 0.002545 | SNP | Missense Mutation | GBM |
| 133 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 154 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 255 | C → F | 0.004219 | SNP | Missense Mutation | SARC |
| 337 | C → R | 0.001969 | SNP | Missense Mutation | HNSC |
| 379 | W → Cfs*13 | 0.003460 | DEL | Frame Shift Del | CESC |
| 379 | W → C | 0.003460 | SNP | Missense Mutation | CESC |
| 482 | Y → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 521 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 583 | G → C | 0.002288 | SNP | Missense Mutation | STAD |
| 613 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 649 | C → C | 0.002020 | SNP | Silent | PRAD |
| 688 | R → C | 0.002545 | SNP | Missense Mutation | GBM |
| 751 | R → C | 0.002288 | SNP | Missense Mutation | STAD |