Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
P41233 Abca1; Abc1 Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) … Mus musculus (Mouse) 2261 aa

Protein Details: P41233 (Abca1)

Protein Information
Accession P41233
Protein Names Phospholipid-transporting ATPase ABCA1 (EC 7.6.2.1) (ATP-binding cassette sub-family A member 1) (ATP-binding cassette transporter 1) (ABC-1) (ATP-binding cassette 1)
Gene Symbol Abca1; Abc1
Organism Mus musculus (Mouse)
Length 2261 aa
Isoforms No isoforms
Related PMIDs 28680068 35477839 37925639 39008777
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.900
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
18
Liver tissue
Specificity: 0.900
18/19 (94.7%)
2
Testis
Specificity: 0.100
2/2 (100.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MACWPQLRLL11LWKNLTFRRR21QTCQLLLEVA31WPLFIFLILI41SVRLSYPPYE
51-10051QHECHFPNKA61MPSAGTLPWV71QGIICNANNP81CFRYPTPGEA91PGVVGNFNKS
101-150101IVSRLFSDAQ111RLLLYSQRDT121SIKDMHKVLR131MLRQIKHPNS141NLKLQDFLVD
151-200151NETFSGFLQH161NLSLPRSTVD171SLLQANVGLQ181KVFLQGYQLH191LASLCNGSKL
201-250201EEIIQLGDAE211VSALCGLPRK221KLDAAERVLR231YNMDILKPVV241TKLNSTSHLP
251-300251TQHLAEATTV261LLDSLGGLAQ271ELFSTKSWSD281MRQEVMFLTN291VNSSSSSTQI
301-350301YQAVSRIVCG311HPEGGGLKIK321SLNWYEDNNY331KALFGGNNTE341EDVDTFYDNS
351-400351TTPYCNDLMK361NLESSPLSRI371IWKALKPLLV381GKILYTPDTP391ATRQVMAEVN
401-450401KTFQELAVFH411DLEGMWEELS421PQIWTFMENS431QEMDLVRTLL441DSRGNDQFWE
451-500451QKLDGLDWTA461QDIMAFLAKN471PEDVQSPNGS481VYTWREAFNE491TNQAIQTISR
501-550501FMECVNLNKL511EPIPTEVRLI521NKSMELLDER531KFWAGIVFTG541ITPDSVELPH
551-600551HVKYKIRMDI561DNVERTNKIK571DGYWDPGPRA581DPFEDMRYVW591GGFAYLQDVV
601-650601EQAIIRVLTG611SEKKTGVYVQ621QMPYPCYVDD631IFLRVMSRSM641PLFMTLAWIY
651-700651SVAVIIKSIV661YEKEARLKET671MRIMGLDNGI681LWFSWFVSSL691IPLLVSAGLL
701-750701VVILKLGNLL711PYSDPSVVFV721FLSVFAMVTI731LQCFLISTLF741SRANLAAACG
751-800751GIIYFTLYLP761YVLCVAWQDY771VGFSIKIFAS781LLSPVAFGFG791CEYFALFEEQ
801-850801GIGVQWDNLF811ESPVEEDGFN821LTTAVSMMLF831DTFLYGVMTW841YIEAVFPGQY
851-900851GIPRPWYFPC861TKSYWFGEEI871DEKSHPGSSQ881KGVSEICMEE891EPTHLRLGVS
901-950901IQNLVKVYRD911GMKVAVDGLA921LNFYEGQITS931FLGHNGAGKT941TTMSILTGLF
951-1000951PPTSGTAYIL961GKDIRSEMSS971IRQNLGVCPQ981HNVLFDMLTV991EEHIWFYARL
1001-10501001KGLSEKHVKA1011EMEQMALDVG1021LPPSKLKSKT1031SQLSGGMQRK1041LSVALAFVGG
1051-11001051SKVVILDEPT1061AGVDPYSRRG1071IWELLLKYRQ1081GRTIILSTHH1091MDEADILGDR
1101-11501101IAIISHGKLC1111CVGSSLFLKN1121QLGTGYYLTL1131VKKDVESSLS1141SCRNSSSTVS
1151-12001151CLKKEDSVSQ1161SSSDAGLGSD1171HESDTLTIDV1181SAISNLIRKH1191VSEARLVEDI
1201-12501201GHELTYVLPY1211EAAKEGAFVE1221LFHEIDDRLS1231DLGISSYGIS1241ETTLEEIFLK
1251-13001251VAEESGVDAE1261TSDGTLPARR1271NRRAFGDKQS1281CLHPFTEDDA1291VDPNDSDIDP
1301-13501301ESRETDLLSG1311MDGKGSYQLK1321GWKLTQQQFV1331ALLWKRLLIA1341RRSRKGFFAQ
1351-14001351IVLPAVFVCI1361ALVFSLIVPP1371FGKYPSLELQ1381PWMYNEQYTF1391VSNDAPEDMG
1401-14501401TQELLNALTK1411DPGFGTRCME1421GNPIPDTPCL1431AGEEDWTISP1441VPQSIVDLFQ
1451-15001451NGNWTMKNPS1461PACQCSSDKI1471KKMLPVCPPG1481AGGLPPPQRK1491QKTADILQNL
1501-15501501TGRNISDYLV1511KTYVQIIAKS1521LKNKIWVNEF1531RYGGFSLGVS1541NSQALPPSHE
1551-16001551VNDAIKQMKK1561LLKLTKDSSA1571DRFLSSLGRF1581MAGLDTKNNV1591KVWFNNKGWH
1601-16501601AISSFLNVIN1611NAILRANLQK1621GENPSQYGIT1631AFNHPLNLTK1641QQLSEVALMT
1651-17001651TSVDVLVSIC1661VIFAMSFVPA1671SFVVFLIQER1681VSKAKHLQFI1691SGVKPVIYWL
1701-17501701SNFVWDMCNY1711VVPATLVIII1721FICFQQKSYV1731SSTNLPVLAL1741LLLLYGWSIT
1751-18001751PLMYPASFVF1761KIPSTAYVVL1771TSVNLFIGIN1781GSVATFVLEL1791FTNNKLNDIN
1801-18501801DILKSVFLIF1811PHFCLGRGLI1821DMVKNQAMAD1831ALERFGENRF1841VSPLSWDLVG
1851-19001851RNLFAMAVEG1861VVFFLITVLI1871QYRFFIRPRP1881VKAKLPPLND1891EDEDVRRERQ
1901-19501901RILDGGGQND1911ILEIKELTKI1921YRRKRKPAVD1931RICIGIPPGE1941CFGLLGVNGA
1951-20001951GKSTTFKMLT1961GDTPVTRGDA1971FLNKNSILSN1981IHEVHQNMGY1991CPQFDAITEL
2001-20502001LTGREHVEFF2011ALLRGVPEKE2021VGKVGEWAIR2031KLGLVKYGEK2041YASNYSGGNK
2051-21002051RKLSTAMALI2061GGPPVVFLDE2071PTTGMDPKAR2081RFLWNCALSI2091VKEGRSVVLT
2101-21502101SHSMEECEAL2111CTRMAIMVNG2121RFRCLGSVQH2131LKNRFGDGYT2141IVVRIAGSNP
2151-22002151DLKPVQEFFG2161LAFPGSVLKE2171KHRNMLQYQL2181PSSLSSLARI2191FSILSQSKKR
2201-22502201LHIEDYSVSQ2211TTLDQVFVNF2221AKDQSDDDHL2231KDLSLHKNQT2241VVDVAVLTSF
2251-22612251LQDEKVKESY2261V
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
3 Prediction (High) - -
23 Prediction (Medium) - -
195 Prediction (Low) - -
215 Prediction (High) - -
309 Experimental - 39008777
504 Prediction (Medium) - -
733 Prediction (Medium) - -
749 Prediction (Medium) - -
1110 Prediction (High) - -
1111 Prediction (High) - -
1281 Experimental CYSMODDB SWISSPALM DBPTM - 28680068
1463 Prediction (Low) - -
1465 Prediction (Low) - -
1477 Prediction (Medium) - -
1723 Prediction (High) - -
1814 Prediction (High) - -
1933 Prediction (Low) - -
1941 Prediction (Low) - -
2086 Prediction (High) - -
2124 Prediction (High) - -
Conservation Scores
PhyloP
PhastCons