Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P46061 | Rangap1 | Ran GTPase-activating protein 1 (RanGAP1) | Mus musculus (Mouse) | 589 aa |
Protein Details: P46061 (Rangap1)
Protein Information
| Accession | P46061 |
|---|---|
| Protein Names | Ran GTPase-activating protein 1 (RanGAP1) |
| Gene Symbol | Rangap1 |
| Organism | Mus musculus (Mouse) |
| Length | 589 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASEDIAKLA11ETLAKTQVAG21GQLSFKGKGL31KLNTAEDAKD41VIKEIEEFDG
51-10051LEALRLEGNT61VGVEAARVIA71KALEKKSELK81RCHWSDMFTG91RLRSEIPPAL
101-150101ISLGEGLITA111GAQLVELDLS121DNAFGPDGVR131GFEALLKSPA141CFTLQELKLN
151-200151NCGMGIGGGK161ILAAALTECH171RKSSAQGKPL181ALKVFVAGRN191RLENDGATAL
201-250201AEAFGIIGTL211EEVHMPQNGI221NHPGVTALAQ231AFAINPLLRV241INLNDNTFTE
251-300251KGGVAMAETL261KTLRQVEVIN271FGDCLVRSKG281AVAIADAVRG291GLPKLKELNL
301-350301SFCEIKRDAA311LVVAEAVADK321AELEKLDLNG331NALGEEGCEQ341LQEVMDSFNM
351-400351AKVLASLSDD361EGEDEDEEEE371GEEDDEEEED381EEDEEDDDEE391EEEQEEEEEP
401-450401PQRGSGEEPA411TPSRKILDPN421SGEPAPVLSS431PTPTDLSTFL441SFPSPEKLLR
451-500451LGPKVSVLIV461QQTDTSDPEK471VVSAFLKVAS481VFRDDASVKT491AVLDAIDALM
501-550501KKAFSCSSFN511SNTFLTRLLI521HMGLLKSEDK531IKAIPSLHGP541LMVLNHVVRQ
551-589551DYFPKALAPL561LLAFVTKPNG571ALETCSFARH581NLLQTLYNI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 82 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.95
|
|
| 141 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 152 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
|
| 169 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
| 274 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.96
|
|
| 303 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 338 | - | - | - |
Deep-Palm: 0.90
|
|
| 506 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.84
|
|
| 575 | SWISSPALM DBPTM CYSMODDB | RanGAP1 C-terminal domain |
liver
(26165157)
| - |
GPS-Palm: 0.88
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
Brain
Specificity: 0.500
1/1 (100.0%)
1
Liver
Specificity: 0.500
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.