Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P46471 | Psmc2 | 26S proteasome regulatory subunit 7 … | Mus musculus (Mouse) | 433 aa |
Protein Details: P46471 (Psmc2)
Protein Information
| Accession | P46471 |
|---|---|
| Protein Names | 26S proteasome regulatory subunit 7 (26S proteasome AAA-ATPase subunit RPT1) (Proteasome 26S subunit ATPase 2) |
| Gene Symbol | Psmc2 |
| Organism | Mus musculus (Mouse) |
| Length | 433 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35358180 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPDYLGADQR11KTKEEEKDDK21PIRALDEGDI31ALLKTYGQST41YSRQIKQVED
51-10051DIQQLLKKIN61ELTGIKESDT71GLAPPALWDL81AADKQTLQSE91QPLQVARCTK
101-150101IINADSEDPK111YIINVKQFAK121FVVDLSDQVA131PTDIEEGMRV141GVDRNKYQIH
151-200151IPLPPKIDPT161VTMMQVEEKP171DVTYSDVGGC181KEQIEKLREV191VETPLLHPER
201-250201FVNLGIEPPK211GVLLFGPPGT221GKTLCARAVA231NRTDACFIRV241IGSELVQKYV
251-300251GEGARMVREL261FEMARTKKAC271LIFFDEIDAI281GGARFDDGAG291GDNEVQRTML
301-350301ELINQLDGFD311PRGNIKVLMA321TNRPDTLDPA331LMRPGRLDRK341IEFSLPDLEG
351-400351RTHIFKIHAR361SMSVERDIRF371ELLARLCPNS381TGAEIRSVCT391EAGMFAIRAR
401-433401RKIATEKDFL411EAVNKVIKSY421AKFSATPRYM431TYN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 98 | - | - | - |
Deep-Palm: 0.83
|
|
| 180 | - | - | - |
Deep-Palm: 0.91
|
|
| 225 | - | - | - |
Deep-Palm: 0.98
|
|
| 236 | - | - | - |
Deep-Palm: 0.98
|
|
| 270 | - | - | - |
Deep-Palm: 0.93
|
|
| 377 | SWISSPALM DBPTM CYSMODDB | AAA+ lid domain |
Liver
(28526873)
MLE
(39008777)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
| 389 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.833
5
Liver
Specificity: 0.833
5/5 (100.0%)
1
Brain
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.