Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P47879 | Igfbp4 | Insulin-like growth factor-binding protein 4 … | Mus musculus (Mouse) | 254 aa |
Protein Details: P47879 (Igfbp4)
Protein Information
| Accession | P47879 |
|---|---|
| Protein Names | Insulin-like growth factor-binding protein 4 (IBP-4) (IGF-binding protein 4) (IGFBP-4) |
| Gene Symbol | Igfbp4 |
| Organism | Mus musculus (Mouse) |
| Length | 254 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLPFGLVAAL11LLAAGPRPSL21GDEAIHCPPC31SEEKLARCRP41PVGCEELVRE
51-10051PGCGCCATCA61LGLGMPCGVY71TPRCGSGMRC81YPPRGVEKPL91RTLMHGQGVC
101-150101TELSEIEAIQ111ESLQTSDKDE121SEHPNNSFNP131CSAHDHRCLQ141KHMAKIRDRS
151-200151KMKIVGTPRE161EPRPVPQGSC171QSELHRALER181LAASQSRTHE191DLFIIPIPNC
201-250201DRNGNFHPKQ211CHPALDGQRG221KCWCVDRKTG231VKLPGGLEPK241GELDCHQLAD
251-254251SFQE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 27 | Insulin-like growth factor-binding protein, IGFBP | - | - |
Deep-Palm: 0.82
|
|
| 30 | Insulin-like growth factor-binding protein, IGFBP INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN | - | - |
Deep-Palm: 0.66
|
|
| 38 | Insulin-like growth factor-binding protein, IGFBP Growth factor receptor cysteine-rich domain superfamily INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN | - | - |
Deep-Palm: 0.71
|
|
| 44 | Insulin-like growth factor-binding protein, IGFBP Growth factor receptor cysteine-rich domain superfamily Insulin-like growth factor binding protein, N-terminal, Cys-rich conserved site INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN | - | - |
Deep-Palm: 0.39
|
|
| 53 | - | - | - |
Deep-Palm: 0.57
|
|
| 55 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.50
|
|
| 56 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.40
|
|
| 59 | - | - | - |
Deep-Palm: 0.26
|
|
| 67 | - | - | - |
Deep-Palm: 0.13
|
|
| 74 | - | - | - |
Deep-Palm: 0.60
|
|
| 80 | - | - | - |
Deep-Palm: 0.54
|
|
| 100 | - | - | - |
Deep-Palm: 0.95
|
|
| 131 | - | - | - |
Deep-Palm: 0.03
|
|
| 138 | - | - | - |
Deep-Palm: 0.05
|
|
| 170 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 200 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.04
|
|
| 211 | - | - | - |
Deep-Palm: 0.04
|
|
| 222 | - | - | - |
Deep-Palm: 0.83
|
|
| 224 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.92
|
|
| 245 | - | - | - |
Deep-Palm: 0.18
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Brain tissue (Mass)
Specificity: 0.556
5/56 (8.9%)
3
Liver tissue (Mass)
Specificity: 0.333
3/8 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.