Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P47914 | RPL29 | Large ribosomal subunit protein eL29 … | Homo sapiens (Human) | 159 aa |
Protein Details: P47914 (RPL29)
Protein Information
| Accession | P47914 |
|---|---|
| Protein Names | Large ribosomal subunit protein eL29 (60S ribosomal protein L29) (Cell surface heparin-binding protein HIP) |
| Gene Symbol | RPL29 |
| Organism | Homo sapiens (Human) |
| Length | 159 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31251020 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAKSKNHTTH11NQSRKWHRNG21IKKPRSQRYE31SLKGVDPKFL41RNMRFAKKHN
51-10051KKGLKKMQAN61NAKAMSARAE71AIKALVKPKE81VKPKIPKGVS91RKLDRLAYIA
101-150101HPKLGKRARA111RIAKGLRLCR121PKAKAKAKAK131DQTKAQAAAP141ASVPAQAPKR
151-159151TQAPTKASE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 119 | SWISSPALM DBPTM CYSMODDB | - |
HeLa
(29575903)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
LNCaP
Specificity: 0.500
2/2 (100.0%)
1
HAP1 cell
Specificity: 0.250
1/1 (100.0%)
1
293T cell
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 29 | Y → C | 0.001969 | SNP | Missense Mutation | LGG |
| 44 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |
| 44 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 91 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 119 | C → C | 0.002020 | SNP | Silent | PRAD |