Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P47962 | Rpl5 | Large ribosomal subunit protein uL18 … | Mus musculus (Mouse) | 297 aa |
Protein Details: P47962 (Rpl5)
Protein Information
| Accession | P47962 |
|---|---|
| Protein Names | Large ribosomal subunit protein uL18 (60S ribosomal protein L5) |
| Gene Symbol | Rpl5 |
| Organism | Mus musculus (Mouse) |
| Length | 297 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29575903 29660268 29733200 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGFVKVVKNK11AYFKRYQVRF21RRRREGKTDY31YARKRLVIQD41KNKYNTPKYR
51-10051MIVRVTNRDI61ICQIAYARIE71GDMIVCAAYA81HELPKYGVKV91GLTNYAAAYC
101-150101TGLLLARRLL111NRFGMDKIYE121GQVEVNGGEY131NVESIDGQPG141AFTCYLDAGL
151-200151ARTTTGNKVF161GALKGAVDGG171LSIPHSTKRF181PGYDSESKEF191NAEVHRKHIM
201-250201GQNVADYMRY211LMEEDEDAYK221KQFSQYIKNN231VTPDMMEEMY241KKAHAAIREN
251-297251PVYEKKPKRE261VKKKRWNRPK271MSLAQKKDRV281AQKKASFLRA291QERAAES
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 62 | SWISSPALM DBPTM CYSMODDB | Ribosomal large subunit proteins 60S L5 and 50S L18 |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.70
|
| 76 | SWISSPALM DBPTM CYSMODDB | Ribosomal large subunit proteins 60S L5 and 50S L18 |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.70
Deep-Palm: 0.84
|
| 100 | SWISSPALM DBPTM CYSMODDB | Ribosomal large subunit proteins 60S L5, and 50S L18 |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.97
|
| 144 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.194
6/6 (100.0%)
3
Brain
Specificity: 0.097
3/3 (100.0%)
2
Raw 264.7
Specificity: 0.065
2/2 (100.0%)
2
Testis
Specificity: 0.065
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.581
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.