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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
P47964 Rpl36 Large ribosomal subunit protein eL36 … Mus musculus (Mouse) 105 aa

Protein Details: P47964 (Rpl36)

Protein Information
AccessionP47964
Protein NamesLarge ribosomal subunit protein eL36 (60S ribosomal protein L36)
Gene SymbolRpl36
OrganismMus musculus (Mouse)
Length105 aa
IsoformsNo isoforms
Related PMIDs 28526873 29733200 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass)
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MALRYPMAVG11LNKGHKVTKN21VSKPRHSRRR31GRLTKHTKFV41RDMIREVCGF
51-10051APYERRAMEL61LKVSKDKRAL71KFIKKRVGTH81IRAKRKREEL91SNVLAAMRKA
101-105101AAKKD
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
48 SWISSPALM DBPTM CYSMODDB Large ribosomal subunit protein eL36 domain superfamily Ribosomal protein L36e Large ribosomal subunit protein eL36
Liver (28526873)
Brain (35358180)
GPS-Palm: 0.93
Deep-Palm: 0.97
Score Interpretation:
GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.235
4/4 (100.0%)
1
Brain
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.706
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine