Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P48381 | Rfx3 | Transcription factor RFX3 (Regulatory factor … | Mus musculus (Mouse) | 749 aa |
Protein Details: P48381 (Rfx3)
Protein Information
| Accession | P48381 |
|---|---|
| Protein Names | Transcription factor RFX3 (Regulatory factor X 3) |
| Gene Symbol | Rfx3 |
| Organism | Mus musculus (Mouse) |
| Length | 749 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQTSETGSDT11GSTVTLQTSV21ASQAAVPTQV31VQQVPVQQQV41QQVQTVQQVQ
51-10051HVYPAQVQYV61EGSDTVYTNG71AIRTTTYPYT81ETQMYSQNTG91GNYFDTQGSS
101-150101AQVTTVVSSH111SMVGTGGIQM121GVTGGQLISS131SGGTYLIGNS141MENSGHSVTH
151-200151TTRASPATIE161MAIETLQKSD171GLSTHRSSLL181NSHLQWLLDN191YETAEGVSLP
201-250201RSTLYNHYLR211HCQEHKLDPV221NAASFGKLIR231SIFMGLRTRR241LGTRGNSKYH
251-300251YYGIRVKPDS261PLNRLQEDMQ271YMAMRQQPMQ281QKQRYKPMQK291VDGVADGFTG
301-350301SGQQTGTSVE311QTVIAQSQHH321QQFLDASRAL331PEFGEVEISS341LPDGTTFEDI
351-400351KSLQSLYREH361CEAILDVVVN371LQFSLIEKLW381QTFWRYSPST391PADGTTITES
401-450401SNLSEIESRL411PKAKLITLCK421HESILKWMCN431CDHGMYQALV441EILIPDVLRP
451-500451IPSALTQAIR461NFAKSLEGWL471SNAMNNIPQR481MIQTKVAAVS491AFAQTLRRYT
501-550501SLNHLAQAAR511AVLQNTSQIN521QMLSDLNRVD531FANVQEQASW541VCQCDDNMVQ
551-600551RLETDFKMTL561QQQSTLEQWA571AWLDNVMMQA581LKPYEGRPSF591PKAARQFLLK
601-650601WSFYSSMVIR611DLTLRSAASF621GSFHLIRLLY631DEYMFYLVEH641RVAQVTGETP
651-700651IAVMGEFGDL661NAVSPGNLDK671DEGSEVESET681DEDLDDSSEP691RAKREKTELS
701-749701QAFPVGCMQP711VLESAVQPSL721LNPLHSEHIV731TSTQTIRQCS741ATGNTYTAV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 212 | - | - | - |
Deep-Palm: 0.19
|
|
| 361 | - | - | - |
Deep-Palm: 0.78
|
|
| 419 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.71
|
|
| 429 | - | - | - |
Deep-Palm: 0.07
|
|
| 431 | - | - | - |
Deep-Palm: 0.05
|
|
| 542 | SWISSPALM DBPTM CYSMODDB | RFX BCD domain |
Forebrain
(28680068)
| - |
Deep-Palm: 0.20
|
| 544 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.14
|
|
| 707 | - | - | - |
Deep-Palm: 0.96
|
|
| 739 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.