Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P50396 | Gdi1; Rabgdia | Rab GDP dissociation inhibitor alpha … | Mus musculus (Mouse) | 447 aa |
Protein Details: P50396 (Gdi1)
Protein Information
| Accession | P50396 |
|---|---|
| Protein Names | Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) |
| Gene Symbol | Gdi1; Rabgdia |
| Organism | Mus musculus (Mouse) |
| Length | 447 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 31772009 34200797 35358180 35477839 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.528
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.528
19/19 (100.0%)
12
Brain tissue
Specificity: 0.333
12/12 (100.0%)
3
Neural Stem Cells
Specificity: 0.083
3/3 (100.0%)
2
Testis
Specificity: 0.056
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDEEYDVIVL11GTGLTECILS21GIMSVNGKKV31LHMDRNPYYG41GESSSITPLE
51-10051ELYKRFQILE61GPPESMGRGR71DWNVDLIPKF81LMANGQLVKM91LLYTEVTRYL
101-150101DFKVVEGSFV111YKGGKIYKVP121STETEALASN131LMGMFEKRRF141RKFLVFVANF
151-200151DENDPKTFEG161VDPQNTSMRD171VYRKFDLGQD181VIDFTGHALA191LYRTDDYLDQ
201-250201PCLETINRIK211LYSESLARYG221KSPYLYPLYG231LGELPQGFAR241LSAIYGGTYM
251-300251LNKPVDDIIM261ENGKVVGVKS271EGEVARCKQL281ICDPSYIPDR291VQKAGQVIRI
301-350301ICILSHPIKN311TNDANSCQII321IPQNQVNRKS331DIYVCMISYA341HNVAAQGKYI
351-400351AIASTTVETA361EPEKEVEPAL371ELLEPIDQKF381VAISDLYEPI391DDGSESQVFC
401-447401SCSYDATTHF411ETTCNDIKDI421YKRMAGSAFD431FENMKRKQND441VFGEADQ
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 17 | Prediction (Low) | - | - |
| 202 | Experimental Prediction (Low) | GDP dissociation inhibitor | 34200797 |
| 282 | Experimental Prediction (Medium) | GDP dissociation inhibitor | 35358180 |
| 302 | Experimental Prediction (High) | GDP dissociation inhibitor | 31311849 |
| 317 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | GDP dissociation inhibitor | 28526873 |
| 335 | Experimental | GDP dissociation inhibitor | 35358180 |