Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P51410 | Rpl9 | Large ribosomal subunit protein uL6 … | Mus musculus (Mouse) | 192 aa |
Protein Details: P51410 (Rpl9)
Protein Information
| Accession | P51410 |
|---|---|
| Protein Names | Large ribosomal subunit protein uL6 (60S ribosomal protein L9) |
| Gene Symbol | Rpl9 |
| Organism | Mus musculus (Mouse) |
| Length | 192 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKTILSNQTV11DIPENVEITL21KGRTVIVKGP31RGTLRRDFNH41INVELSLLGK
51-10051KKKRLRVDKW61WGNRKELATV71RTICSHVQNM81IKGVTLGFRY91KMRSVYAHFP
101-150101INVVIQENGS111LVEIRNFLGE121KYIRRVRMRT131GVACSVSQAQ141KDELILEGND
151-192151IELVSNSAAL161IQQATTVKNK171DIRKFLDGIY181VSEKGTVQQA191DE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 74 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L6 | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.80
|
| 134 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein L6 |
Liver
(28526873)
MLE
(39008777)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.316
6/6 (100.0%)
1
Brain
Specificity: 0.053
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.632
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.