Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P51660 | Hsd17b4 | Peroxisomal multifunctional enzyme type 2 … | Mus musculus (Mouse) | 735 aa |
Protein Details: P51660 (Hsd17b4)
Protein Information
| Accession | P51660 |
|---|---|
| Protein Names | Peroxisomal multifunctional enzyme type 2 (MFE-2) (17-beta-hydroxysteroid dehydrogenase 4) (17-beta-HSD 4) (D-bifunctional protein) (DBP) (Multifunctional protein 2) (MFP-2) [Cleaved into: (3R)-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.n12); Enoyl-CoA hydratase 2 (EC 4.2.1.107) (EC 4.2.1.119) (3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase)] |
| Gene Symbol | Hsd17b4 |
| Organism | Mus musculus (Mouse) |
| Length | 735 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASPLRFDGR11VVLVTGAGGG21LGRAYALAFA31ERGALVIVND41LGGDFKGIGK
51-10051GSSAADKVVA61EIRRKGGKAV71ANYDSVEAGE81KLVKTALDTF91GRIDVVVNNA
101-150101GILRDRSFSR111ISDEDWDIIH121RVHLRGSFQV131TRAAWDHMKK141QNYGRILMTS
151-200151SASGIYGNFG161QANYSAAKLG171ILGLCNTLAI181EGRKNNIHCN191TIAPNAGSRM
201-250201TETVLPEDLV211EALKPEYVAP221LVLWLCHESC231EENGGLFEVG241AGWIGKLRWE
251-300251RTLGAIVRKR261NQPMTPEAVR271DNWEKICDFS281NASKPQTIQE291STGGIVEVLH
301-350301KVDSEGISPN311RTSHAAPAAT321SGFVGAVGHK331LPSFSSSYTE341LQSIMYALGV
351-400351GASVKNPKDL361KFVYEGSADF371SCLPTFGVIV381AQKSMMNGGL391AEVPGLSFNF
401-450401AKALHGEQYL411ELYKPLPRSG421ELKCEAVIAD431ILDKGSGVVI441VMDVYSYSGK
451-500451ELICYNQFSV461FVVGSGGFGG471KRTSEKLKAA481VAVPNRPPDA491VLRDATSLNQ
501-550501AALYRLSGDW511NPLHIDPDFA521SVAGFEKPIL531HGLCTFGFSA541RHVLQQFADN
551-600551DVSRFKAIKV561RFAKPVYPGQ571TLQTEMWKEG581NRIHFQTKVH591ETGDVVISNA
601-650601YVDLVPASGV611STQTPSEGGE621LQSALVFGEI631GRRLKSVGRE641VVKKANAVFE
651-700651WHITKGGTVA661AKWTIDLKSG671SGEVYQGPAK681GSADVTIIIS691DEDFMEVVFG
701-735701KLDPQKAFFS711GRLKARGNIM721LSQKLQMILK731DYAKL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 175 | SWISSPALM DBPTM CYSMODDB | short chain dehydrogenase |
Liver
(28526873)
Brain
(31311849)
|
Liver
(34884899)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.97
|
| 189 | SWISSPALM DBPTM CYSMODDB | - |
Brain
(31311849)
liver
(26165157)
|
Liver
(37925639)
Brain
(31311849)
|
GPS-Palm: 0.85
Deep-Palm: 0.90
|
| 226 | - | - | - |
Deep-Palm: 0.98
|
|
| 230 | - | - | - |
Deep-Palm: 0.95
|
|
| 277 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
|
Brain
(31311849)
|
GPS-Palm: 0.83
Deep-Palm: 0.41
|
| 372 | - | - | - |
Deep-Palm: 0.89
|
|
| 424 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.98
|
|
| 454 | - | - | - |
Deep-Palm: 0.37
|
|
| 534 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.353
6/6 (100.0%)
3
Brain
Specificity: 0.176
3/3 (100.0%)
2
Testis
Specificity: 0.118
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Brain tissue (Mass)
Specificity: 0.235
4/56 (7.1%)
2
Liver tissue (Mass)
Specificity: 0.118
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.