Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P51863 | Atp6v0d1; Atp6d | V-type proton ATPase subunit d … | Mus musculus (Mouse) | 351 aa |
Protein Details: P51863 (Atp6v0d1)
Protein Information
| Accession | P51863 |
|---|---|
| Protein Names | V-type proton ATPase subunit d 1 (V-ATPase subunit d 1) (P39) (Physophilin) (V-ATPase 40 kDa accessory protein) (V-ATPase AC39 subunit) (Vacuolar proton pump subunit d 1) |
| Gene Symbol | Atp6v0d1; Atp6d |
| Organism | Mus musculus (Mouse) |
| Length | 351 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 28680068 29733200 31772009 34200797 34884899 35358180 35477839 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.500
19/19 (100.0%)
8
Brain tissue
Specificity: 0.211
8/12 (66.7%)
6
Liver membrane
Specificity: 0.158
6/6 (100.0%)
3
Neural Stem Cells
Specificity: 0.079
3/3 (100.0%)
2
Testis
Specificity: 0.053
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSFFPELYFN11VDNGYLEGLV21RGLKAGVLSQ31ADYLNLVQCE41TLEDLKLHLQ
51-10051STDYGNFLAN61EASPLTVSVI71DDKLKEKMVV81EFRHMRNHAY91EPLASFLDFI
101-150101TYSYMIDNVI111LLITGTLHQR121SIAELVPKCH131PLGSFEQMEA141VNIAQTPAEL
151-200151YNAILVDTPL161AAFFQDCISE171QDLDEMNIEI181IRNTLYKAYL191ESFYKFCTLL
201-250201GGTTADAMCP211ILEFEADRRA221FIITINSFGT231ELSKEDRAKL241FPHCGRLYPE
251-300251GLAQLARADD261YEQVKNVADY271YPEYKLLFEG281AGSNPGDKTL291EDRFFEHEVK
301-350301LNKLAFLNQF311HFGVFYAFVK321LKEQECRNIV331WIAECIAQRH341RAKIDNYIPI
351-351351F
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 39 | Experimental CYSMODDB SWISSPALM DBPTM | ATP synthase (C/AC39) subunit | 28680068 |
| 197 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | ATP synthase (C/AC39) subunit | 28680068 |
| 209 | Experimental | ATP synthase (C/AC39) subunit | 28680068 |
| 244 | Experimental Prediction (Medium) | ATP synthase (C/AC39) subunit | 34200797 |
| 335 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | ATP synthase (C/AC39) subunit | 28526873 |