Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P52189 | Kcnj4 | Inward rectifier potassium channel 4 … | Mus musculus (Mouse) | 445 aa |
Protein Details: P52189 (Kcnj4)
Protein Information
| Accession | P52189 |
|---|---|
| Protein Names | Inward rectifier potassium channel 4 (Inward rectifier K(+) channel Kir2.3) (IRK-3) (Potassium channel, inwardly rectifying subfamily J member 4) |
| Gene Symbol | Kcnj4 |
| Organism | Mus musculus (Mouse) |
| Length | 445 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35358180 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MHGHNRNGQA11HVPRRKRRNR21FVKKNGQCNV31YFANLSNKSQ41RYMADIFTTC
51-10051VDTRWRYMLM61IFSAAFLVSW71LFFGLLFWWI81AFFHGDLEAS91PSVPAVGGPG
101-150101GNGGESPNAP111KPCIMHVNGF121LGAFLFSVET131QTTIGYGFRC141VTEECPLAVI
151-200151AVVVQSIVGC161VIDSFMIGTI171MAKMARPKKR181AQTLLFSHHA191VISVRDGKLC
201-250201LMWRVGNLRK211SHIVEAHVRA221QLIKPYMTQE231GEYLPLDQRD241LNVGYDIGLD
251-300251RIFLVSPIII261VHEIDEDSPL271YGMGKEELES281EDFEIVVILE291GMVEATAMTT
301-350301QARSSYLASE311ILWGHRFEPV321VFEEKSHYKV331DYSRFHKTYE341VAGTPCCSAR
351-400351ELQESKITVL361PAPPPPPSAF371CYENELALMS381QEEEEMEEEA391AAAAAVAAGL
401-445401GLEAGSKEEA411GIIRMLEFGS421HLDLERMQAA431TLPLDNISYR441RESRI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 28 | Potassium channel, inwardly rectifying, Kir, cytoplasmic Potassium channel, inwardly rectifying, transmembrane domain | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.27
|
|
| 50 | SWISSPALM DBPTM CYSMODDB | Potassium channel, inwardly rectifying, transmembrane domain Inward rectifier potassium channel transmembrane domain Voltage-gated potassium channels Potassium channel, inwardly rectifying, Kir |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.29
|
| 113 | - | - | - |
Deep-Palm: 0.64
|
|
| 140 | - | - | - |
Deep-Palm: 0.61
|
|
| 145 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.46
|
|
| 160 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.47
|
|
| 200 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.62
|
|
| 346 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.88
|
|
| 347 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.88
|
|
| 371 | - | - | - |
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.