Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P52503 | Ndufs6 | NADH dehydrogenase [ubiquinone] iron-sulfur protein … | Mus musculus (Mouse) | 116 aa |
Protein Details: P52503 (Ndufs6)
Protein Information
| Accession | P52503 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial (Complex I-13kD-A) (CI-13kD-A) (NADH-ubiquinone oxidoreductase 13 kDa-A subunit) |
| Gene Symbol | Ndufs6 |
| Organism | Mus musculus (Mouse) |
| Length | 116 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAVLTFRRL11LTLPRAARGF21GVQVSPSGEK31ITHTGQVYDE41KDYRRVRFVD
51-10051RQKEVNENFA61IDLIAQQPVN71EVEHRIIACD81GGGGALGHPK91VYINLDKETK
101-116101TGTCGYCGLQ111FKQHHH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | SWISSPALM DBPTM CYSMODDB | Zinc-finger domain |
Brain
(31311849)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.82
|
| 104 | SWISSPALM DBPTM CYSMODDB | Zinc-finger domain |
brain
(39008777)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.65
Deep-Palm: 0.03
|
| 107 | SWISSPALM DBPTM CYSMODDB | Zinc-finger domain |
brain
(39008777)
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
6
Liver
Specificity: 0.143
6/6 (100.0%)
6
Brain
Specificity: 0.143
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
30
Brain tissue (Mass)
Specificity: 0.714
30/56 (53.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.