Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P52788 | SMS | Spermine synthase (SPMSY) (EC 2.5.1.22) … | Homo sapiens (Human) | 366 aa |
Protein Details: P52788 (SMS)
Protein Information
| Accession | P52788 |
|---|---|
| Protein Names | Spermine synthase (SPMSY) (EC 2.5.1.22) (Spermidine aminopropyltransferase) |
| Gene Symbol | SMS |
| Organism | Homo sapiens (Human) |
| Length | 366 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAARHSTLD11FMLGAKADGE21TILKGLQSIF31QEQGMAESVH41TWQDHGYLAT
51-10051YTNKNGSFAN61LRIYPHGLVL71LDLQSYDGDA81QGKEEIDSIL91NKVEERMKEL
101-150101SQDSTGRVKR111LPPIVRGGAI121DRYWPTADGR131LVEYDIDEVV141YDEDSPYQNI
151-200151KILHSKQFGN161ILILSGDVNL171AESDLAYTRA181IMGSGKEDYT191GKDVLILGGG
201-250201DGGILCEIVK211LKPKMVTMVE221IDQMVIDGCK231KYMRKTCGDV241LDNLKGDCYQ
251-300251VLIEDCIPVL261KRYAKEGREF271DYVINDLTAV281PISTSPEEDS291TWEFLRLILD
301-350301LSMKVLKQDG311KYFTQGNCVN321LTEALSLYEE331QLGRLYCPVE341FSKEIVCVPS
351-366351YLELWVFYTV361WKKAKP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 206 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
|
| 229 | - | - | - |
Deep-Palm: 0.28
|
|
| 237 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.38
|
|
| 248 | - | - | - |
Deep-Palm: 0.77
|
|
| 256 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.94
|
|
| 318 | - | - | - |
Deep-Palm: 0.77
|
|
| 337 | SWISSPALM DBPTM CYSMODDB | Spermine/spermidine synthase domain | - | - |
Deep-Palm: 0.96
|
| 347 | - | - | - |
Deep-Palm: 0.52
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
HAP1 cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.