Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P53702 | Hccs | Holocytochrome c-type synthase (EC 4.4.1.17) … | Mus musculus (Mouse) | 272 aa |
Protein Details: P53702 (Hccs)
Protein Information
| Accession | P53702 |
|---|---|
| Protein Names | Holocytochrome c-type synthase (EC 4.4.1.17) (Cytochrome c-type heme lyase) (CCHL) |
| Gene Symbol | Hccs |
| Organism | Mus musculus (Mouse) |
| Length | 272 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31772009 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGASASSPAT11AVNASNASDG21QPASPPSGCP31MHKGQRKGCP41VTAATSDLTS
51-10051ESKAHTVPAH61QDRAYDYVEC71PVTGARAKDK81ESLDPSNLMP91PPNQTPSPDQ
101-150101PFTLSTSREE111SSIPRADSEK121KWVYPSEQMF131WNAMLRKGWK141WKDDDISQKD
151-200151MYNIIRIHNQ161NNEQAWKEIL171KWEALHAHEC181PCGPSLVRFG191GKAREYSPRA
201-250201RIRSWMGYEL211PFDRHDWIIN221RCGTEVRYVI231DYYDGGEVNK241EYQFTILDVR
251-272251PAFDSFSAVW261DRMKVAWWRW271TS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | - | - | - |
Deep-Palm: 0.60
|
|
| 39 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.77
|
|
| 70 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.77
|
| 180 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.87
|
|
| 182 | - |
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.87
|
|
| 222 | - | - | - |
Deep-Palm: 0.21
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.375
3
Liver
Specificity: 0.103
3/3 (100.0%)
2
Brain
Specificity: 0.069
2/2 (100.0%)
2
Testis
Specificity: 0.069
2/2 (100.0%)
1
NSC
Specificity: 0.034
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.724
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.