Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P53798 | Fdft1; Erg9 | Squalene synthase (SQS) (SS) (EC … | Mus musculus (Mouse) | 416 aa |
Protein Details: P53798 (Fdft1)
Protein Information
| Accession | P53798 |
|---|---|
| Protein Names | Squalene synthase (SQS) (SS) (EC 2.5.1.21) (FPP:FPP farnesyltransferase) (Farnesyl-diphosphate farnesyltransferase) |
| Gene Symbol | Fdft1; Erg9 |
| Organism | Mus musculus (Mouse) |
| Length | 416 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31772009 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
3
Neural Stem Cells
Specificity: 0.750
3/3 (100.0%)
1
Liver tissue
Specificity: 0.250
1/19 (5.3%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MEFVKCLGHP11EEFYNLLRFR21MGGRRNFIPK31MDQDSLSSSL41KTCYKYLNQT
51-10051SRSFAAVIQA61LDGDIRHAIC71VFYLVLRALD81TVEDDMSISV91EKKIPLLCNF
101-150101HTFLYDPEWR111FTESKEKDRQ121VLEDFPTISL131EFRNLAEKYQ141TVIDDICHRM
151-200151GCGMAEFVDK161DVTSKQDWDK171YCHYVAGLVG181IGLSRLFSAS191EFEDPIVGED
201-250201IECANSMGLF211LQKTNIIRDY221LEDQQEGRKF231WPQEVWGRYI241KKLEDFAKPE
251-300251NVDVAVQCLN261ELITNTLQHI271PDVLTYLSRL281RNQSVFNFCA291IPQVMAIATL
301-350301AACYNNQQVF311KGVVKIRKGQ321AVTLMMDATN331MPAVKAIIYQ341YIEEIYHRIP
351-400351NSDPSSSKTK361QVISKIRTQN371LPNCQLISRS381HYSPIYLSFI391MLLAALSWQY
401-416401LSTLSQVTED411YVQREH
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 6 | Prediction (Medium) | - | - |
| 43 | Prediction (Medium) | - | - |
| 70 | Prediction (Medium) | - | - |
| 289 | Prediction (Low) | - | - |
| 303 | Prediction (Medium) | - | - |
| 374 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) | - | 28526873 |