Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P53811 | Pitpnb | Phosphatidylinositol transfer protein beta isoform … | Mus musculus (Mouse) | 271 aa |
Protein Details: P53811 (Pitpnb)
Protein Information
| Accession | P53811 |
|---|---|
| Protein Names | Phosphatidylinositol transfer protein beta isoform (PI-TP-beta) (PtdIns transfer protein beta) (PtdInsTP beta) |
| Gene Symbol | Pitpnb |
| Organism | Mus musculus (Mouse) |
| Length | 271 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVLIKEFRVV11LPCSVQEYQV21GQLYSVAEAS31KNETGGGEGI41EVLKNEPYEN
51-10051DGEKGQYTHK61IYHLKSKVPA71FVRMIAPEGS81LVFHEKAWNA91YPYCRTIVTN
101-150101EYMKDDFFIK111IETWHKPDLG121TLENVHGLDP131NTWKTVEIVH141IDIADRSQVE
151-200151PADYKADEDP161ALFHSVKTKR171GPLGPNWKKE181LANTPDCPRM191CAYKLVTIKF
201-250201KWWGLQSKVE211NFIQKQEKRI221FTNLHRQLFC231WIDKWIDLTM241EDIRRMEDET
251-271251QKELETMRKK261GSVRGTSAAD271A
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | SWISSPALM DBPTM CYSMODDB | Bet v1-like Phosphatidylinositol transfer protein Phosphatidylinositol transfer protein, N-terminal START-like domain superfamily |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.90
|
| 94 | SWISSPALM DBPTM CYSMODDB | Phosphatidylinositol transfer protein |
Brain
(34200797)
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.20
|
| 187 | SWISSPALM DBPTM CYSMODDB | Phosphatidylinositol transfer protein |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.77
|
| 191 | - | - | - |
Deep-Palm: 0.49
|
|
| 230 | SWISSPALM DBPTM CYSMODDB | Phosphatidylinositol transfer protein |
Liver
(28526873)
| - |
Deep-Palm: 0.25
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.167
4/4 (100.0%)
2
Brain
Specificity: 0.083
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.750
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.