Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P54116 | Stom | Stomatin (Erythrocyte band 7 integral … | Mus musculus (Mouse) | 284 aa |
Protein Details: P54116 (Stom)
Protein Information
| Accession | P54116 |
|---|---|
| Protein Names | Stomatin (Erythrocyte band 7 integral membrane protein) (Erythrocyte membrane protein band 7.2) (Protein 7.2b) |
| Gene Symbol | Stom |
| Organism | Mus musculus (Mouse) |
| Length | 284 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29575903 31772009 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSDKRQSSHV11QSQRIPESFR21ENSKTELGAC31GWILVAASFF41FVIITFPISI
51-10051WICIKIVKEY61ERVIIFRLGR71ILQGGAKGPG81LFFILPCTDS91LIKVDMRTIS
101-150101FDIPPQEVLT111KDSVTISVDG121VVYYRVQNAT131LAVANITNAD141SATRLLAQTT
151-200151LRNALGTKNL161SQILSDREEI171AHHMQSTLDD181ATDDWGIKVE191RVEIKDVKLP
201-250201VQLQRAMAAE211AEAAREARAK221VIAAEGEMNA231SRALKEASMV241ITESPAALQL
251-284251RYLQTLTTIA261AEKNSTIVFP271LPVDMLQGIM281GSNH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 30 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.87
|
|
| 53 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.73
|
|
| 87 | SWISSPALM DBPTM CYSMODDB | SPFH domain / Band 7 family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
6
Liver
Specificity: 0.333
6/6 (100.0%)
4
Raw 264.7
Specificity: 0.222
4/4 (100.0%)
2
Brain
Specificity: 0.111
2/2 (100.0%)
2
Testis
Specificity: 0.111
2/2 (100.0%)
1
NSC
Specificity: 0.056
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.167
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.