Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P55096 | Abcd3 | ATP-binding cassette sub-family D member … | Mus musculus (Mouse) | 659 aa |
Protein Details: P55096 (Abcd3)
Protein Information
| Accession | P55096 |
|---|---|
| Protein Names | ATP-binding cassette sub-family D member 3 (EC 3.1.2.-) (EC 7.6.2.-) (68 kDa peroxisomal membrane protein) (PMP68) (70 kDa peroxisomal membrane protein) (PMP70) |
| Gene Symbol | Abcd3 |
| Organism | Mus musculus (Mouse) |
| Length | 659 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 34884899 35358180 35477839 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAFSKYLTA11RNTSLAGAAF21LLLCLLHKRR31RALGLHGKKS41GKPPLQNNEK
51-10051EGKKERAVVD61KVFLSRLSQI71LKIMVPRTFC81KETGYLLLIA91VMLVSRTYCD
101-150101VWMIQNGTLI111ESGIIGRSSK121DFKRYLFNFI131AAMPLISLVN141NFLKYGLNEL
151-200151KLCFRVRLTR161YLYEEYLQAF171TYYKMGNLDN181RIANPDQLLT191QDVEKFCNSV
201-250201VDLYSNLSKP211FLDIVLYIFK221LTSAIGAQGP231ASMMAYLLVS241GLFLTRLRRP
251-300251IGKMTIMEQK261YEGEYRYVNS271RLITNSEEIA281FYNGNKREKQ291TIHSVFRKLV
301-350301EHLHNFIFFR311FSMGFIDSII321AKYVATVVGY331LVVSRPFLDL341AHPRHLHSTH
351-400351SELLEDYYQS361GRMLLRMSQA371LGRIVLAGRE381MTRLAGFTAR391ITELMQVLKD
401-450401LNHGRYERTM411VSQQEKGIEG421AQASPLVPGA431GEIINTDNII441KFDHVPLATP
451-500451NGDILIQDLS461FEVRSGANVL471ICGPNGCGKS481SLFRVLGELW491PLFGGRLTKP
501-550501ERGKLFYVPQ511RPYMTLGTLR521DQVIYPDGKE531DQKKRGISDQ541VLKEYLDNVQ
551-600551LGHILEREGG561WDSVQDWMDV571LSGGEKQRMA581MARLFYHKPQ591FAILDECTSA
601-650601VSVDVEDYIY611SHCRKVGITL621FTVSHRKSLW631KHHEYYLHMD641GRGNYEFKKI
651-659651TEDTVEFGS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
|
| 80 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.95
|
|
| 99 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.32
|
|
| 153 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.93
|
|
| 197 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.53
|
|
| 472 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 477 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.95
|
|
| 597 | - | - | - |
Deep-Palm: 0.78
|
|
| 613 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
5
Liver
Specificity: 0.500
5/5 (100.0%)
3
Brain
Specificity: 0.300
3/3 (100.0%)
2
Testis
Specificity: 0.200
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.