Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P56213 | Gfer | FAD-linked sulfhydryl oxidase ALR (EC … | Mus musculus (Mouse) | 198 aa |
Protein Details: P56213 (Gfer)
Protein Information
| Accession | P56213 |
|---|---|
| Protein Names | FAD-linked sulfhydryl oxidase ALR (EC 1.8.3.2) (Augmenter of liver regeneration) |
| Gene Symbol | Gfer |
| Organism | Mus musculus (Mouse) |
| Length | 198 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAPSEPAGF11PRGSRFSFLP21GGARSEMTDD31LVTDARGRGA41RHRDDTTPAA
51-10051APAPQGLEHG61KRPCRACVDF71KSWMRTQQKR81DIKFREDCPQ91DREELGRHTW
101-150101AFLHTLAAYY111PDRPTPEQQQ121DMAQFIHIFS131KFYPCEECAE141DIRKRIGRNQ
151-198151PDTSTRVSFS161QWLCRLHNEV171NRKLGKPDFD181CSRVDERWRD191GWKDGSCD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 64 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.70
|
|
| 67 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.58
|
|
| 88 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.64
|
|
| 135 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 138 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.68
Deep-Palm: 0.04
|
|
| 164 | SWISSPALM DBPTM CYSMODDB | Erv1 / Alr family |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.81
|
| 181 | SWISSPALM DBPTM CYSMODDB | Erv1 / Alr family |
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.88
Deep-Palm: 0.71
|
| 197 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.200
5/5 (100.0%)
2
Testis
Specificity: 0.080
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.720
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.