Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P56528 | Cd38 | ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 … | Mus musculus (Mouse) | 304 aa |
Protein Details: P56528 (Cd38)
Protein Information
| Accession | P56528 |
|---|---|
| Protein Names | ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 (EC 3.2.2.-) (EC 3.2.2.6) (2'-phospho-ADP-ribosyl cyclase) (2'-phospho-ADP-ribosyl cyclase/2'-phospho-cyclic-ADP-ribose transferase) (EC 2.4.99.20) (2'-phospho-cyclic-ADP-ribose transferase) (ADP-ribosyl cyclase 1) (ADPRC 1) (Cyclic ADP-ribose hydrolase 1) (cADPR hydrolase 1) (I-19) (NIM-R5 antigen) (CD antigen CD38) |
| Gene Symbol | Cd38 |
| Organism | Mus musculus (Mouse) |
| Length | 304 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MANYEFSQVS11GDRPGCRLSR21KAQIGLGVGL31LVLIALVVGI41VVILLRPRSL
51-10051LVWTGEPTTK61HFSDIFLGRC71LIYTQILRPE81MRDQNCQEIL91STFKGAFVSK
101-150101NPCNITREDY111APLVKLVTQT121IPCNKTLFWS131KSKHLAHQYT141WIQGKMFTLE
151-200151DTLLGYIADD161LRWCGDPSTS171DMNYVSCPHW181SENCPNNPIT191VFWKVISQKF
201-250201AEDACGVVQV211MLNGSLREPF221YKNSTFGSVE231VFSLDPNKVH241KLQAWVMHDI
251-300251EGASSNACSS261SSLNELKMIV271QKRNMIFACV281DNYRPARFLQ291CVKNPEHPSC
301-304301RLNT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
Forebrain
(28680068)
brain
(39008777)
|
Liver
(37925639)
Brain
(35358180)
|
GPS-Palm: 0.78
Deep-Palm: 0.98
|
| 70 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.65
|
|
| 86 | SWISSPALM DBPTM CYSMODDB | ADP-ribosyl cyclase |
Liver
(28526873)
|
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.79
|
| 103 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.87
|
|
| 123 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.88
|
|
| 164 | - | - | - |
Deep-Palm: 0.18
|
|
| 177 | - | - | - |
Deep-Palm: 0.03
|
|
| 184 | - | - | - |
Deep-Palm: 0.03
|
|
| 205 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.81
|
|
| 258 | SWISSPALM DBPTM CYSMODDB | ADP-ribosyl cyclase |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.70
Deep-Palm: 0.65
|
| 279 | SWISSPALM DBPTM CYSMODDB | ADP-ribosyl cyclase |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.46
|
| 291 | - | - | - |
Deep-Palm: 0.18
|
|
| 300 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
6
Liver
Specificity: 0.188
6/6 (100.0%)
2
Brain
Specificity: 0.062
2/2 (100.0%)
2
Testis
Specificity: 0.062
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.773
17
Brain tissue (Mass)
Specificity: 0.531
17/56 (30.4%)
5
Liver tissue (Mass)
Specificity: 0.156
5/8 (62.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.