Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P56656 | Cyp2c39 | Cytochrome P450 2C39 (EC 1.14.14.1) … | Mus musculus (Mouse) | 490 aa |
Protein Details: P56656 (Cyp2c39)
Protein Information
| Accession | P56656 |
|---|---|
| Protein Names | Cytochrome P450 2C39 (EC 1.14.14.1) (CYPIIC39) |
| Gene Symbol | Cyp2c39 |
| Organism | Mus musculus (Mouse) |
| Length | 490 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDLVTFLVLT11LSSLILLSLW21RQSCGRGSLP31PGPTPFPIIG41NFLQIDIKNV
51-10051SQSLTNFSKA61YGPVFTLYLG71SRPTVVLHGY81EAVKEALIDH91GEEFSDRGSI
101-150101PMVEKINNGL111GIVFSNGNRW121KEIRRFTLTT131LRNLGMGKRN141IEDRVQEEAQ
151-200151CLVEELRKTK161GSPCDPTFIL171SCAPCNVICS181IIFQDRFDYK191DKDFLMLMEK
201-250201LNENVKILSS211PWLQVCNNFP221LLIDYCPGSH231HKVLKNVKYI241RSYLLEKIKE
251-300251HQESLDVTNP261RDFIDYYLIK271QKQANHIQQA281EFSLENLACT291INNLFAAGTE
301-350301TTSTTLRYAL311LLLMKYPDVT321AKVQEEIDHV331IGRHRSPCMQ341DRNHMPYTDA
351-400351MIHEVQRFIN361LVPNNIPRAV371TCDIKFRNYL381IPKGTTVVTS391LTSVLHDSKE
401-450401FPNPELFDPG411HFLDANGNFK421KSDHFMPFSA431GKRVCAGEGL441ARMELFLFLT
451-490451TILQNFKLKS461LVHPKDIDMI471PFVNGLIALP481PHYQVCIIPR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.98
|
|
| 151 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
|
| 164 | - | - | - |
Deep-Palm: 0.89
|
|
| 172 | - | - | - |
Deep-Palm: 0.76
|
|
| 175 | - | - | - |
Deep-Palm: 0.60
|
|
| 179 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.31
|
|
| 216 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.23
|
|
| 226 | - | - | - |
Deep-Palm: 0.27
|
|
| 289 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
GPS-Palm: 0.77
Deep-Palm: 0.80
|
| 338 | - | - | - |
Deep-Palm: 0.04
|
|
| 372 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.90
|
|
| 435 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.96
|
| 486 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Liver
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.