Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P56657 | Cyp2c40 | Cytochrome P450 2C40 (EC 1.14.14.-) … | Mus musculus (Mouse) | 491 aa |
Protein Details: P56657 (Cyp2c40)
Protein Information
| Accession | P56657 |
|---|---|
| Protein Names | Cytochrome P450 2C40 (EC 1.14.14.-) (CYPIIC40) |
| Gene Symbol | Cyp2c40 |
| Organism | Mus musculus (Mouse) |
| Length | 491 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDPFVVLVLC11LSFLLVLSLW21RQRSARGNLP31PGPTPLPIIG41NYHLIDMKDI
51-10051GQCLTNFSKT61YGPVFTLYFG71SQPIVVLHGY81EAIKEALIDH91GEEFSGRGRI
101-150101PVFDKVSTGK111GIGFSHGNVW121KATRVFTVNT131LRNLGMGKRT141IENKVQEEAQ
151-200151WLMKELKKTN161GSPCDPQFII171GCAPCNVICS181IVFQNRFDYK191DKDFLSLIGK
201-250201VNECTEILSS211PGCQIFNAVP221ILIDYCPGSH231NKLFKNHTWI241KSYLLGKIKE
251-300251HEESLDVTNP261RDFIDYFLIQ271RRQKNGIEHM281DYTIEHLATL291VTDLVFGGTE
301-350301TLSSTMRFAL311LLLMKHTHIT321AKVQEEIDNV331IGRHRSPCMQ341DRNHMPYTNA
351-400351MVHEVQRYID361LGPNGVVHEV371TCDTKFRNYF381IPKGTQVMTS391LTSVLHDSTE
401-450401FPNPEVFDPG411HFLDDNGNFK421KSDYFVPFSA431GKRICVGESL441ARMELFLFLT
451-491451TILQNFKLKP461LVDPKDIDMT471PKHSGFSKIP481PNFQMCFIPV491E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | - | - | - |
Deep-Palm: 0.15
|
|
| 53 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
GPS-Palm: 0.89
Deep-Palm: 0.83
|
| 164 | - | - | - |
Deep-Palm: 0.43
|
|
| 172 | - | - | - |
Deep-Palm: 0.16
|
|
| 175 | - | - | - |
Deep-Palm: 0.18
|
|
| 179 | - | - | - |
Deep-Palm: 0.15
|
|
| 204 | - | - | - |
Deep-Palm: 0.79
|
|
| 213 | - | - | - |
Deep-Palm: 0.34
|
|
| 226 | - | - | - |
Deep-Palm: 0.09
|
|
| 338 | - | - | - |
Deep-Palm: 0.04
|
|
| 372 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
Deep-Palm: 0.71
|
| 435 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.94
|
| 486 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Liver
Specificity: 1.000
6/6 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.