Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P56818 | Bace1 | Beta-secretase 1 (EC 3.4.23.46) (Aspartyl … | Mus musculus (Mouse) | 501 aa |
Protein Details: P56818 (Bace1)
Protein Information
| Accession | P56818 |
|---|---|
| Protein Names | Beta-secretase 1 (EC 3.4.23.46) (Aspartyl protease 2) (ASP2) (Asp 2) (Beta-site amyloid precursor protein cleaving enzyme 1) (Beta-site APP cleaving enzyme 1) (Memapsin-2) (Membrane-associated aspartic protease 2) |
| Gene Symbol | Bace1 |
| Organism | Mus musculus (Mouse) |
| Length | 501 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPALHWLLL11WVGSGMLPAQ21GTHLGIRLPL31RSGLAGPPLG41LRLPRETDEE
51-10051SEEPGRRGSF61VEMVDNLRGK71SGQGYYVEMT81VGSPPQTLNI91LVDTGSSNFA
101-150101VGAAPHPFLH111RYYQRQLSST121YRDLRKGVYV131PYTQGKWEGE141LGTDLVSIPH
151-200151GPNVTVRANI161AAITESDKFF171INGSNWEGIL181GLAYAEIARP191DDSLEPFFDS
201-250201LVKQTHIPNI211FSLQLCGAGF221PLNQTEALAS231VGGSMIIGGI241DHSLYTGSLW
251-300251YTPIRREWYY261EVIIVRVEIN271GQDLKMDCKE281YNYDKSIVDS291GTTNLRLPKK
301-350301VFEAAVKSIK311AASSTEKFPD321GFWLGEQLVC331WQAGTTPWNI341FPVISLYLMG
351-400351EVTNQSFRIT361ILPQQYLRPV371EDVATSQDDC381YKFAVSQSST391GTVMGAVIME
401-450401GFYVVFDRAR411KRIGFAVSAC421HVHDEFRTAA431VEGPFVTADM441EDCGYNIPQT
451-500451DESTLMTIAY461VMAAICALFM471LPLCLMVCQW481RCLRCLRHQH491DDFADDISLL
501-501501K
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 216 | - | - | - |
Deep-Palm: 0.75
|
|
| 278 | - | - | - |
Deep-Palm: 0.07
|
|
| 330 | - | - | - |
Deep-Palm: 0.34
|
|
| 380 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.61
|
|
| 420 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.88
|
|
| 443 | - | - | - |
Deep-Palm: 0.22
|
|
| 466 | - | - | - |
Deep-Palm: 0.09
|
|
| 474 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.43
|
| 478 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.66
|
| 482 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.56
|
| 485 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.41
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.100
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.900
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.