Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P58242 | Smpdl3b | Acid sphingomyelinase-like phosphodiesterase 3b (ASM-like … | Mus musculus (Mouse) | 456 aa |
Protein Details: P58242 (Smpdl3b)
Protein Information
| Accession | P58242 |
|---|---|
| Protein Names | Acid sphingomyelinase-like phosphodiesterase 3b (ASM-like phosphodiesterase 3b) (EC 3.1.4.-) |
| Gene Symbol | Smpdl3b |
| Organism | Mus musculus (Mouse) |
| Length | 456 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTLLGWLIFL11APWGVAGAQL21GRFWHISDLH31LDPNYTVSKD41PLQVCPSAGS
51-10051QPVLNAGPWG61DYLCDSPWAL71INSSLYAMKE81IEPKPDFILW91TGDDTPHVPN
101-150101ESLGEAAVLA111IVERLTNLIK121EVFPDTKVYA131ALGNHDFHPK141NQFPAQSNRI
151-200151YNQVAELWRP161WLSNESYALF171KRGAFYSEKL181PGPSRAGRVV191VLNTNLYYSN
201-250201NEQTAGMADP211GEQFRWLGDV221LSNASRDGEM231VYVIGHVPPG241FFEKTQNKAW
251-300251FRESFNEEYL261KVIQKHHRVI271AGQFFGHHHT281DSFRMFYDNT291GAPINVMFLT
301-350301PGVTPWKTTL311PGVVDGANNP321GIRIFEYDRA331TLNLKDLVTY341FLNLRQANVQ
351-400351ETPRWEQEYR361LTEAYQVPDA371SVSSMHTALT381RIASEPHILQ391RYYVYNSVSY
401-450401NHLTCEDSCR411IEHVCAIQHV421AFNTYATCLH431GLGAKLVPGF441LLILTLLPSL
451-456451HVLEVL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 45 | SPHINGOMYELIN PHOSPHODIESTERASE | - | - |
Deep-Palm: 0.81
|
|
| 64 | - | - | - |
Deep-Palm: 0.76
|
|
| 405 | - | - | - |
Deep-Palm: 0.03
|
|
| 409 | - | - | - |
Deep-Palm: 0.02
|
|
| 415 | - | - | - |
Deep-Palm: 0.03
|
|
| 428 | - | - | - |
Deep-Palm: 0.78
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.