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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
P60709 ACTB Actin, cytoplasmic 1 (EC 3.6.4.-) … Homo sapiens (Human) 375 aa

Protein Details: P60709 (ACTB)

Protein Information
Accession P60709
Protein Names Actin, cytoplasmic 1 (EC 3.6.4.-) (Beta-actin) [Cleaved into: Actin, cytoplasmic 1, N-terminally processed]
Gene Symbol ACTB
Organism Homo sapiens (Human)
Length 375 aa
Isoforms No isoforms
Related PMIDs 19801377 21076176 22496122 25914232 29733200 31382980 33636221
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
10
HAP1 cells
Specificity: 0.400
10/10 (100.0%)
6
Jurkat T cells
Specificity: 0.240
6/25 (24.0%)
4
293T cells
Specificity: 0.160
4/10 (40.0%)
2
CEMx174 cells
Specificity: 0.080
2/3 (66.7%)
1
U937 cells
Specificity: 0.040
1/1 (100.0%)
1
Endothelial cells
Specificity: 0.040
1/2 (50.0%)
1
Liver membrane
Specificity: 0.040
1/1 (100.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
LNCaP cells
Specificity: 0.000
0/46 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDDDIAALVV11DNGSGMCKAG21FAGDDAPRAV31FPSIVGRPRH41QGVMVGMGQK
51-10051DSYVGDEAQS61KRGILTLKYP71IEHGIVTNWD81DMEKIWHHTF91YNELRVAPEE
101-150101HPVLLTEAPL111NPKANREKMT121QIMFETFNTP131AMYVAIQAVL141SLYASGRTTG
151-200151IVMDSGDGVT161HTVPIYEGYA171LPHAILRLDL181AGRDLTDYLM191KILTERGYSF
201-250201TTTAEREIVR211DIKEKLCYVA221LDFEQEMATA231ASSSSLEKSY241ELPDGQVITI
251-300251GNERFRCPEA261LFQPSFLGME271SCGIHETTFN281SIMKCDVDIR291KDLYANTVLS
301-350301GGTTMYPGIA311DRMQKEITAL321APSTMKIKII331APPERKYSVW341IGGSILASLS
351-375351TFQQMWISKQ361EYDESGPSIV371HRKCF
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
17 CYSMODDB SWISSPALM DBPTM Actin -
217 CYSMODDB SWISSPALM DBPTM Prediction (Low) Actin -
257 Experimental Actin 19801377
272 Experimental Actin 19801377
285 CYSMODDB SWISSPALM DBPTM Actin -
374 Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
69 Y → C 0.001764 SNP Missense Mutation LUAD
86 W → C 0.027027 SNP Missense Mutation DLBC
91 Y → C 0.001764 SNP Missense Mutation LUAD
156 G → C 0.002545 SNP Missense Mutation GBM
177 R → C 0.002020 SNP Missense Mutation PRAD
177 R → C 0.001887 SNP Missense Mutation UCEC
196 R → C 0.002288 SNP Missense Mutation STAD
196 R → C 0.002427 SNP Missense Mutation BLCA
210 R → C 0.001887 SNP Missense Mutation UCEC
217 C → Y 0.027027 SNP Missense Mutation DLBC
217 C → C 0.001969 SNP Silent LGG
240 Y → C 0.001764 SNP Missense Mutation LUAD
265 S → C 0.002141 SNP Missense Mutation SKCM
279 F → C 0.002545 SNP Missense Mutation GBM
281 S → C 0.002427 SNP Missense Mutation BLCA
294 Y → C 0.002288 SNP Missense Mutation STAD
335 R → C 0.003774 SNP Missense Mutation UCEC
372 R → C 0.002506 SNP Missense Mutation COAD