Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P60866 | RPS20 | Small ribosomal subunit protein uS10 … | Homo sapiens (Human) | 119 aa |
Protein Details: P60866 (RPS20)
Protein Information
| Accession | P60866 |
|---|---|
| Protein Names | Small ribosomal subunit protein uS10 (40S ribosomal protein S20) |
| Gene Symbol | RPS20 |
| Organism | Homo sapiens (Human) |
| Length | 119 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31382980 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAFKDTGKTP11VEPEVAIHRI21RITLTSRNVK31SLEKVCADLI41RGAKEKNLKV
51-10051KGPVRMPTKT61LRITTRKTPC71GEGSKTWDRF81QMRIHKRLID91LHSPSEIVKQ
101-119101ITSISIEPGV111EVEVTIADA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 36 | SWISSPALM DBPTM CYSMODDB | Small ribosomal subunit protein uS10 domain Ribosomal protein S10p/S20e Small ribosomal subunit protein uS10 domain superfamily Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS10, conserved site | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.97
|
| 70 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein S10p/S20e | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.64
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
1
HAP1 cell
Specificity: 0.333
1/1 (100.0%)
1
U937 cell
Specificity: 0.333
1/1 (100.0%)
1
293T cell
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 79 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 79 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |