Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P60904 | Dnajc5 | DnaJ homolog subfamily C member … | Mus musculus (Mouse) | 198 aa |
Protein Details: P60904 (Dnajc5)
Protein Information
| Accession | P60904 |
|---|---|
| Protein Names | DnaJ homolog subfamily C member 5 (Cysteine string protein) (CSP) (Cysteine-string protein isoform alpha) |
| Gene Symbol | Dnajc5 |
| Organism | Mus musculus (Mouse) |
| Length | 198 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29575903 29733200 31772009 34200797 34884899 35358180 35477839 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADQRQRSLS11TSGESLYHVL21GLDKNATSDD31IKKSYRKLAL41KYHPDKNPDN
51-10051PEAADKFKEI61NNAHAILTDA71TKRNIYDKYG81SLGLYVAEQF91GEENVNTYFV
101-150101LSSWWAKALF111VVCGLLTCCY121CCCCLCCCFN131CCCGKCKPKA141PEGEETEFYV
151-198151SPEDLEAQLQ161SDEREATDTP171IVIQPASATE181TTQLTADSHP191SYHTDGFN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 113 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.45
|
|
| 118 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.42
|
|
| 119 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.39
|
|
| 121 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.33
|
|
| 122 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.34
|
|
| 123 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.36
|
|
| 124 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.23
|
|
| 126 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.29
|
|
| 127 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.32
|
|
| 128 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.45
|
|
| 131 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.38
|
|
| 132 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.32
|
|
| 133 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.24
|
|
| 136 | - |
Brain
(34200797)
| - |
GPS-Palm: 0.86
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.385
5
Liver
Specificity: 0.385
5/5 (100.0%)
3
Brain
Specificity: 0.231
3/3 (100.0%)
2
Raw 264.7
Specificity: 0.154
2/2 (100.0%)
2
Testis
Specificity: 0.154
2/2 (100.0%)
1
NSC
Specificity: 0.077
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.