Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P61222 | Abce1 | ATP-binding cassette sub-family E member … | Mus musculus (Mouse) | 599 aa |
Protein Details: P61222 (Abce1)
Protein Information
| Accession | P61222 |
|---|---|
| Protein Names | ATP-binding cassette sub-family E member 1 (RNase L inhibitor) (EC 3.6.5.-) (Ribonuclease 4 inhibitor) (RNS4I) |
| Gene Symbol | Abce1 |
| Organism | Mus musculus (Mouse) |
| Length | 599 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADKLTRIAI11VNHDKCKPKK21CRQECKKSCP31VVRMGKLCIE41VTPQSKIAWI
51-10051SETLCIGCGI61CIKKCPFGAL71SIVNLPSNLE81KETTHRYCAN91AFKLHRLPIP
101-150101RPGEVLGLVG111TNGIGKSTAL121KILAGKQKPN131LGKYDDPPDW141QEILTYFRGS
151-200151ELQNYFTKIL161EDDLKAIIKP171QYVDQIPKAA181KGTVGSILDR191KDETKTQAIV
201-250201CQQLDLTHLK211ERNVEDLSGG221ELQRFACAVV231CIQKADIFMF241DEPSSYLDVK
251-300251QRLKAAITIR261SLINPDRYII271VVEHDLSVLD281YLSDFICCLY291GVPSAYGVVT
301-350301MPFSVREGIN311IFLDGYVPTE321NLRFRDASLV331FKVAETANEE341EVKKMCMYKY
351-400351PGMKKKMGEF361ELAIVAGEFT371DSEIMVMLGE381NGTGKTTFIR391MLAGRLKPDE
401-450401GGEVPVLNVS411YKPQKISPKS421TGSVRQLLHE431KIRDAYTHPQ441FVTDVMKPLQ
451-500451IENIIDQEVQ461TLSGGELQRV471ALALCLGKPA481DVYLIDEPSA491YLDSEQRLMA
501-550501ARVVKRFILH511AKKTAFVVEH521DFIMATYLAD531RVIVFDGVPS541KNTVANSPQT
551-599551LLAGMNKFLS561QLEITFRRDP571NNYRPRINKL581NSIKDVEQKK591SGNYFFLDD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | RLI1 RNase L inhibitor RLI-like, possible metal-binding domain | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.22
|
|
| 21 | RLI1 RNase L inhibitor RLI-like, possible metal-binding domain | - | - |
Deep-Palm: 0.45
|
|
| 25 | RLI1 RNase L inhibitor RLI-like, possible metal-binding domain | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.55
|
|
| 29 | RLI1 RNase L inhibitor RLI-like, possible metal-binding domain | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.73
|
|
| 38 | 4Fe-4S ferredoxins P-loop containing nucleoside triphosphate hydrolase 4Fe-4S ferredoxin-type, iron-sulphur binding domain RLI1 Possible Fer4-like domain in RNase L inhibitor, RLI |
MLE
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.89
|
|
| 55 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.90
|
|
| 58 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.91
|
|
| 61 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.90
|
|
| 65 | 4Fe-4S dicluster domain |
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.85
Deep-Palm: 0.95
|
|
| 88 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.85
|
|
| 201 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.75
Deep-Palm: 0.95
|
| 227 | ABC transporter |
MLE
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.94
|
|
| 231 | ABC transporter |
MLE
(39008777)
| - |
GPS-Palm: 0.79
Deep-Palm: 0.93
|
|
| 287 | - | - | - |
Deep-Palm: 0.91
|
|
| 288 | - | - | - |
Deep-Palm: 0.84
|
|
| 346 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.52
|
|
| 475 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.200
4/4 (100.0%)
1
Brain
Specificity: 0.050
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.750
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.