Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P61247 | RPS3A | Small ribosomal subunit protein eS1 … | Homo sapiens (Human) | 264 aa |
Protein Details: P61247 (RPS3A)
Protein Information
| Accession | P61247 |
|---|---|
| Protein Names | Small ribosomal subunit protein eS1 (40S ribosomal protein S3a) (v-fos transformation effector protein) (Fte-1) |
| Gene Symbol | RPS3A |
| Organism | Homo sapiens (Human) |
| Length | 264 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31251020 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVGKNKRLT11KGGKKGAKKK21VVDPFSKKDW31YDVKAPAMFN41IRNIGKTLVT
51-10051RTQGTKIASD61GLKGRVFEVS71LADLQNDEVA81FRKFKLITED91VQGKNCLTNF
101-150101HGMDLTRDKM111CSMVKKWQTM121IEAHVDVKTT131DGYLLRLFCV141GFTKKRNNQI
151-200151RKTSYAQHQQ161VRQIRKKMME171IMTREVQTND181LKEVVNKLIP191DSIGKDIEKA
201-250201CQSIYPLHDV211FVRKVKMLKK221PKFELGKLME231LHGEGSSSGK241ATGDETGAKV
251-264251ERADGYEPPV261QESV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 96 | - | - | - |
Deep-Palm: 0.37
|
|
| 111 | - | - | - |
Deep-Palm: 0.26
|
|
| 139 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
HeLa
(29575903)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.92
|
| 201 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
SW480 cell line
(26865113)
| - |
GPS-Palm: 0.76
Deep-Palm: 0.89
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
LNCaP
Specificity: 0.500
3/3 (100.0%)
2
HAP1 cell
Specificity: 0.333
2/2 (100.0%)
1
293T cell
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.