Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P61620 | Sec61a1; Sec61a | Protein transport protein Sec61 subunit … | Mus musculus (Mouse) | 476 aa |
Protein Details: P61620 (Sec61a1)
Protein Information
| Accession | P61620 |
|---|---|
| Protein Names | Protein transport protein Sec61 subunit alpha isoform 1 (Sec61 alpha-1) |
| Gene Symbol | Sec61a1; Sec61a |
| Organism | Mus musculus (Mouse) |
| Length | 476 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31772009 34884899 35477839 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.576
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.576
19/19 (100.0%)
6
Liver membrane
Specificity: 0.182
6/6 (100.0%)
3
Brain tissue
Specificity: 0.091
3/12 (25.0%)
3
Neural Stem Cells
Specificity: 0.091
3/3 (100.0%)
2
Testis
Specificity: 0.061
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAIKFLEVIK11PFCVILPEIQ21KPERKIQFKE31KVLWTAITLF41IFLVCCQIPL
51-10051FGIMSSDSAD61PFYWMRVILA71SNRGTLMELG81ISPIVTSGLI91MQLLAGAKII
101-150101EVGDTPKDRA111LFNGAQKLFG121MIITIGQSIV131YVMTGMYGDP141SEMGAGICLL
151-200151ITIQLFVAGL161IVLLLDELLQ171KGYGLGSGIS181LFIATNICET191IVWKAFSPTT
201-250201VNTGRGMEFE211GAIIALFHLL221ATRTDKVRAL231REAFYRQNLP241NLMNLIATIF
251-300251VFAVVIYFQG261FRVDLPIKSA271RYRGQYNTYP281IKLFYTSNIP291IILQSALVSN
301-350301LYVISQMLSA311RFSGNLLVSL321LGTWSDTSSG331GPARAYPVGG341LCYYLSPPES
351-400351FGSVLEDPVH361AVVYIVFMLG371SCAFFSKTWI381EVSGSSAKDV391AKQLKEQQMV
401-450401MRGHRETSMV411HELNRYIPTA421AAFGGLCIGA431LSVLADFLGA441IGSGTGILLA
451-476451VTIIYQYFEI461FVKEQSEVGS471MGALLF
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 13 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28526873 |
| 45 | Prediction (Medium) | - | - |
| 46 | Prediction (Medium) | - | - |
| 188 | Prediction (Medium) | - | - |
| 372 | Prediction (Low) | - | - |