Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P61922-2 | Abat | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) … | Mus musculus (Mouse) | 444 aa |
Protein Details: P61922-2 (Abat)
Protein Information
| Accession | P61922-2 |
|---|---|
| Protein Names | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) ((S)-3-amino-2-methylpropionate transaminase) (EC 2.6.1.22) (GABA aminotransferase) (GABA-AT) (Gamma-amino-N-butyrate transaminase) (GABA transaminase) (GABA-T) (L-AIBAT) |
| Gene Symbol | Abat |
| Organism | Mus musculus (Mouse) |
| Length | 444 aa |
| Isoforms | |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAFLLITRRL11ACSSQKNLHL21FIPGSRYISQ31AAAKVDIEFD41YDGPLMKTEV
51-10051PGPRSKELMK61QLNTIQNAEA71VHFFCNYEES81RGNYLVDVDG91NRMLDLYSQI
101-150101SSVPIGYNHP111ALAKLVQQPQ121NASTFINRPA131LGILPPENFV141DKLQESLMSV
151-200151APRGMSQLIT161MACGSCSNEN171AFKTIFMWYR181SKERGQRGFS191KEELETCMVN
201-250201QSPGCPDYSI211LSFMGAFHGR221TMGCLATTHS231KAIHKIDIPS241FDWPIAPFPR
251-300251LKYPLEEFTT261DNQQEEARCL271EEVEDLIVKY281RKKKRTVAGI291IVEPIQSEGG
301-350301DNHASDDFFR311KLRDIARKPY321RIFNTWLGDP331SKNLLLAEVI341NIIKREDLLN
351-400351NVARVGKTLL361TGLLDLQAQY371PQFISRVRGR381GTFCSFDTPD391EAIRNKLILI
401-444401ARNKGVVLGG411CGDKSIRFRP421TLVFRDHHAH431LFLSIFSGIL441ADFK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.15
|
|
| 75 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.14
|
|
| 163 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.30
|
|
| 166 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.09
|
|
| 197 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.72
|
|
| 205 | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.45
|
|
| 224 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.72
|
|
| 269 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 384 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.80
|
|
| 411 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
27
Brain tissue (Mass)
Specificity: 1.000
27/56 (48.2%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.