Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62080 | Tspan5 | Tetraspanin-5 (Tspan-5) (Tetraspan NET-4) (Transmembrane … | Mus musculus (Mouse) | 268 aa |
Protein Details: P62080 (Tspan5)
Protein Information
| Accession | P62080 |
|---|---|
| Protein Names | Tetraspanin-5 (Tspan-5) (Tetraspan NET-4) (Transmembrane 4 superfamily member 9) |
| Gene Symbol | Tspan5 |
| Organism | Mus musculus (Mouse) |
| Length | 268 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGKHYKGPE11VSCCIKYFIF21GFNVIFWFLG31ITFLGIGLWA41WNEKGVLSNI
51-10051SSITDLGGFD61PVWLFLVVGG71VMFILGFAGC81IGALRENTFL91LKFFSVFLGI
101-150101IFFLELTAGV111LAFVFKDWIK121DQLYFFINNN131IRAYRDDIDL141QNLIDFTQEY
151-200151WQCCGAFGAD161DWNLNIYFNC171TDSNASRERC181GVPFSCCTKD191PAEDVINTQC
201-250201GYDARQKPEV211DQQIVIYTKG221CVPQFEKWLQ231DNLTIVAGIF241IGIALLQIFG
251-268251ICLAQNLVSD261IEAVRASW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
Deep-Palm: 0.04
|
|
| 14 | - | - | - |
Deep-Palm: 0.17
|
|
| 80 | - | - | - |
Deep-Palm: 0.98
|
|
| 153 | - | - | - |
Deep-Palm: 0.16
|
|
| 154 | - | - | - |
Deep-Palm: 0.17
|
|
| 170 | - | - | - |
Deep-Palm: 0.07
|
|
| 180 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.19
|
|
| 186 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.61
|
| 187 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.55
|
| 200 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.33
|
|
| 221 | - | - | - |
Deep-Palm: 0.59
|
|
| 252 | - | - | - |
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 0.667
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain tissue (Mass)
Specificity: 0.333
1/56 (1.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.