Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62192 | Psmc1 | 26S proteasome regulatory subunit 4 … | Mus musculus (Mouse) | 440 aa |
Protein Details: P62192 (Psmc1)
Protein Information
| Accession | P62192 |
|---|---|
| Protein Names | 26S proteasome regulatory subunit 4 (P26s4) (26S proteasome AAA-ATPase subunit RPT2) (Proteasome 26S subunit ATPase 1) |
| Gene Symbol | Psmc1 |
| Organism | Mus musculus (Mouse) |
| Length | 440 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGQSQSGGHG11PGGGKKDDKD21KKKKYEPPVP31TRVGKKKKKT41KGPDAASKLP
51-10051LVTPHTQCRL61KLLKLERIKD71YLLMEEEFIR81NQEQMKPLEE91KQEEERSKVD
101-150101DLRGTPMSVG111TLEEIIDDNH121AIVSTSVGSE131HYVSILSFVD141KDLLEPGCSV
151-200151LLNHKVHAVI161GVLMDDTDPL171VTVMKVEKAP181QETYADIGGL191DNQIQEIKES
201-250201VELPLTHPEY211YEEMGIKPPK221GVILYGPPGT231GKTLLAKAVA241NQTSATFLRV
251-300251VGSELIQKYL261GDGPKLVREL271FRVAEEHAPS281IVFIDEIDAI291GTKRYDSNSG
301-350301GEREIQRTML311ELLNQLDGFD321SRGDVKVIMA331TNRIETLDPA341LIRPGRIDRK
351-400351IEFPLPDEKT361KKRIFQIHTS371RMTLADDVTL381DDLIMAKDDL391SGADIKAICT
401-440401EAGLMALRER411RMKVTNEDFK421KSKENVLYKK431QEGTPEGLYL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 58 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
MLE
(39008777)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 148 | - | - | - |
Deep-Palm: 0.97
|
|
| 399 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Liver
Specificity: 0.714
5/5 (100.0%)
2
Testis
Specificity: 0.286
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.