Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62249 | RPS16 | Small ribosomal subunit protein uS9 … | Homo sapiens (Human) | 146 aa |
Protein Details: P62249 (RPS16)
Protein Information
| Accession | P62249 |
|---|---|
| Protein Names | Small ribosomal subunit protein uS9 (40S ribosomal protein S16) |
| Gene Symbol | RPS16 |
| Organism | Homo sapiens (Human) |
| Length | 146 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31251020 31382980 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPSKGPLQSV11QVFGRKKTAT21AVAHCKRGNG31LIKVNGRPLE41MIEPRTLQYK
51-10051LLEPVLLLGK61ERFAGVDIRV71RVKGGGHVAQ81IYAIRQSISK91ALVAYYQKYV
101-146101DEASKKEIKD111ILIQYDRTLL121VADPRRCESK131KFGGPGARAR141YQKSYR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 25 | DBPTM SWISSPALM | Small ribosomal subunit protein uS5 domain 2-type fold, subgroup Ribosomal protein uS5 domain 2-type superfamily Small ribosomal subunit protein uS9 Ribosomal protein S9/S16 | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
| 127 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
2
LNCaP
Specificity: 0.333
2/2 (100.0%)
2
HAP1 cell
Specificity: 0.333
2/2 (100.0%)
1
U937 cell
Specificity: 0.167
1/1 (100.0%)
1
293T cell
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 69 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 85 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |