Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62281 | Rps11 | Small ribosomal subunit protein uS17 … | Mus musculus (Mouse) | 158 aa |
Protein Details: P62281 (Rps11)
Protein Information
| Accession | P62281 |
|---|---|
| Protein Names | Small ribosomal subunit protein uS17 (40S ribosomal protein S11) |
| Gene Symbol | Rps11 |
| Organism | Mus musculus (Mouse) |
| Length | 158 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADIQTERAY11QKQPTIFQNK21KRVLLGETGK31EKLPRYYKNI41GLGFKTPKEA
51-10051IEGTYIDKKC61PFTGNVSIRG71RILSGVVTKM81KMQRTIVIRR91DYLHYIRKYN
101-150101RFEKRHKNMS111VHLSPCFRDV121QIGDIVTVGE131CRPLSKTVRF141NVLKVTKAAG
151-158151TKKQFQKF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 60 | SWISSPALM DBPTM CYSMODDB | Ribosomal S17 N-terminal |
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.84
Deep-Palm: 0.94
|
| 116 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein S17 |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.69
Deep-Palm: 0.82
|
| 131 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein S17 |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.214
6/6 (100.0%)
1
Brain
Specificity: 0.036
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.750
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.