Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62331 | Arf6 | ADP-ribosylation factor 6 (EC 3.6.5.2) | Mus musculus (Mouse) | 175 aa |
Protein Details: P62331 (Arf6)
Protein Information
| Accession | P62331 |
|---|---|
| Protein Names | ADP-ribosylation factor 6 (EC 3.6.5.2) |
| Gene Symbol | Arf6 |
| Organism | Mus musculus (Mouse) |
| Length | 175 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGKVLSKIFG11NKEMRILMLG21LDAAGKTTIL31YKLKLGQSVT41TIPTVGFNVE
51-10051TVTYKNVKFN61VWDVGGQDKI71RPLWRHYYTG81TQGLIFVVDC91ADRDRIDEAR
101-150101QELHRIINDR111EMRDAIILIF121ANKQDLPDAM131KPHEIQEKLG141LTRIRDRNWY
151-175151VQPSCATSGD161GLYEGLTWLT171SNYKS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 90 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.82
Deep-Palm: 0.56
|
|
| 155 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.78
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
2
Testis
Specificity: 0.118
2/2 (100.0%)
2
Liver
Specificity: 0.118
2/2 (100.0%)
1
Brain
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.706
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.