Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62334 | Psmc6 | 26S proteasome regulatory subunit 10B … | Mus musculus (Mouse) | 389 aa |
Protein Details: P62334 (Psmc6)
Protein Information
| Accession | P62334 |
|---|---|
| Protein Names | 26S proteasome regulatory subunit 10B (26S proteasome AAA-ATPase subunit RPT4) (Proteasome 26S subunit ATPase 6) (Proteasome subunit p42) |
| Gene Symbol | Psmc6 |
| Organism | Mus musculus (Mouse) |
| Length | 389 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADPRDKALQ11DYRKKLLEHK21EIDGRLKELR31EQLKELTKQY41EKSENDLKAL
51-10051QSVGQIVGEV61LKQLTEEKFI71VKATNGPRYV81VGCRRQLDKS91KLKPGTRVAL
101-150101DMTTLTIMRY111LPREVDPLVY121NMSHEDPGNV131SYSEIGGLSE141QIRELREVIE
151-200151LPLTNPELFQ161RVGIIPPKGC171LLYGPPGTGK181TLLARAVASQ191LDCNFLKVVS
201-250201SSIVDKYIGE211SARLIREMFN221YARDHQPCII231FMDEIDAIGG241RRFSEGTSAD
251-300251REIQRTLMEL261LNQMDGFDTL271HRVKMIMATN281RPDTLDPALL291RPGRLDRKIH
301-350301IDLPNEQARL311DILKIHAGPI321TKHGEIDYEA331IVKLSDGFNG341ADLRNVCTEA
351-389351GMFAIRADHD361FVVQEDFMKA371VRKVADSKKL381ESKLDYKPV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 83 | - | - | - |
Deep-Palm: 0.97
|
|
| 170 | - | - | - |
Deep-Palm: 0.97
|
|
| 193 | SWISSPALM DBPTM CYSMODDB | ATPase family associated with various cellular activities (AAA) |
liver
(26165157)
MLE
(39008777)
Liver
(28526873)
| - |
Deep-Palm: 0.98
|
| 228 | - | - | - |
Deep-Palm: 0.23
|
|
| 347 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.625
5/5 (100.0%)
2
Testis
Specificity: 0.250
2/2 (100.0%)
1
Brain
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.