Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62482 | Kcnab2 | Voltage-gated potassium channel subunit beta-2 … | Mus musculus (Mouse) | 367 aa |
Protein Details: P62482 (Kcnab2)
Protein Information
| Accession | P62482 |
|---|---|
| Protein Names | Voltage-gated potassium channel subunit beta-2 (EC 1.1.1.-) (K(+) channel subunit beta-2) (Kv-beta-2) (Neuroimmune protein F5) |
| Gene Symbol | Kcnab2 |
| Organism | Mus musculus (Mouse) |
| Length | 367 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MYPESTTGSP11ARLSLRQTGS21PGMIYSTRYG31SPKRQLQFYR41NLGKSGLRVS
51-10051CLGLGTWVTF61GGQITDEMAE71HLMTLAYDNG81INLFDTAEVY91AAGKAEVVLG
101-150101NIIKKKGWRR111SSLVITTKIF121WGGKAETERG131LSRKHIIEGL141KASLERLQLE
151-200151YVDVVFANRP161DPNTPMEETV171RAMTHVINQG181MAMYWGTSRW191SSMEIMEAYS
201-250201VARQFNLIPP211ICEQAEYHMF221QREKVEVQLP231ELFHKIGVGA241MTWSPLACGI
251-300251VSGKYDSGIP261PYSRASLKGY271QWLKDKILSE281EGRRQQAKLK291ELQAIAERLG
301-350301CTLPQLAIAW311CLRNEGVSSV321LLGASNAEQL331MENIGAIQVL341PKLSSSIVHE
351-367351IDSILGNKPY361SKKDYRS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 51 | NADP-dependent oxidoreductase domain superfamily Potassium channel, voltage-dependent, beta subunit, KCNAB-related | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.97
|
|
| 212 | - | - | - |
Deep-Palm: 0.46
|
|
| 248 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.89
Deep-Palm: 0.89
|
| 301 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
|
| 311 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 0.118
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.882
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.