Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62701 | RPS4X | Small ribosomal subunit protein eS4, … | Homo sapiens (Human) | 263 aa |
Protein Details: P62701 (RPS4X)
Protein Information
| Accession | P62701 |
|---|---|
| Protein Names | Small ribosomal subunit protein eS4, X isoform (40S ribosomal protein S4) (SCR10) (Single copy abundant mRNA protein) |
| Gene Symbol | RPS4X |
| Organism | Homo sapiens (Human) |
| Length | 263 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31251020 31382980 32944167 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARGPKKHLK11RVAAPKHWML21DKLTGVFAPR31PSTGPHKLRE41CLPLIIFLRN
51-10051RLKYALTGDE61VKKICMQRFI71KIDGKVRTDI81TYPAGFMDVI91SIDKTGENFR
101-150101LIYDTKGRFA111VHRITPEEAK121YKLCKVRKIF131VGTKGIPHLV141THDARTIRYP
151-200151DPLIKVNDTI161QIDLETGKIT171DFIKFDTGNL181CMVTGGANLG191RIGVITNRER
201-250201HPGSFDVVHV211KDANGNSFAT221RLSNIFVIGK231GNKPWISLPR241GKGIRLTIAE
251-263251ERDKRLAAKQ261SSG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 41 | SWISSPALM DBPTM CYSMODDB | Small ribosomal subunit protein eS4 RS4NT (NUC023) domain RNA-binding S4 domain superfamily |
HeLa
(37611173)
HeLa
(29575903)
|
Unknown
(32651440)
|
GPS-Palm: 0.94
Deep-Palm: 0.96
|
| 65 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 124 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.88
|
|
| 181 | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.89
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.250
2
HAP1 cell
Specificity: 0.167
2/2 (100.0%)
2
PC3
Specificity: 0.167
2/2 (100.0%)
1
LNCaP
Specificity: 0.083
1/1 (100.0%)
1
U937 cell
Specificity: 0.083
1/1 (100.0%)
1
293T cell
Specificity: 0.083
1/1 (100.0%)
1
cerebral cortex
Specificity: 0.083
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Cerebral Cortex (Mass)
Specificity: 0.333
4/4 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.