Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62717 | Rpl18a | Large ribosomal subunit protein eL20 … | Mus musculus (Mouse) | 176 aa |
Protein Details: P62717 (Rpl18a)
Protein Information
| Accession | P62717 |
|---|---|
| Protein Names | Large ribosomal subunit protein eL20 (60S ribosomal protein L18a) |
| Gene Symbol | Rpl18a |
| Organism | Mus musculus (Mouse) |
| Length | 176 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKASGTLREY11KVVGRCLPTP21KCHTPPLYRM31RIFAPNHVVA41KSRFWYFVSQ
51-10051LKKMKKSSGE61IVYCGQVFEK71SPLRVKNFGI81WLRYDSRSGT91HNMYREYRDL
101-150101TTAGAVTQCY111RDMGARHRAR121AHSIQIMKVE131EIAAGKCRRP141AVKQFHDSKI
151-176151KFPLPHRVLR161RQHKPRFTTK171RPNTFF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | Large ribosomal subunit protein eL20, eukaryotes Large ribosomal subunit protein eL20 |
MLE
(39008777)
| - |
Deep-Palm: 0.87
|
|
| 22 | Large ribosomal subunit protein eL20, eukaryotes Large ribosomal subunit protein eL20 |
brain
(39008777)
MLE
(39008777)
|
Liver
(37925639)
|
Deep-Palm: 0.50
|
|
| 64 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
| 109 | SWISSPALM DBPTM CYSMODDB | Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A |
MLE
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.91
|
| 137 | - | - | - |
Deep-Palm: 0.60
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.214
6/6 (100.0%)
3
Brain
Specificity: 0.107
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.679
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.