Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62736 | ACTA2 | Actin, aortic smooth muscle (EC … | Homo sapiens (Human) | 377 aa |
Protein Details: P62736 (ACTA2)
Protein Information
| Accession | P62736 |
|---|---|
| Protein Names | Actin, aortic smooth muscle (EC 3.6.4.-) (Alpha-actin-2) (Cell growth-inhibiting gene 46 protein) [Cleaved into: Actin, aortic smooth muscle, intermediate form] |
| Gene Symbol | ACTA2 |
| Organism | Homo sapiens (Human) |
| Length | 377 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 29733200 31251020 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MCEEEDSTAL11VCDNGSGLCK21AGFAGDDAPR31AVFPSIVGRP41RHQGVMVGMG
51-10051QKDSYVGDEA61QSKRGILTLK71YPIEHGIITN81WDDMEKIWHH91SFYNELRVAP
101-150101EEHPTLLTEA111PLNPKANREK121MTQIMFETFN131VPAMYVAIQA141VLSLYASGRT
151-200151TGIVLDSGDG161VTHNVPIYEG171YALPHAIMRL181DLAGRDLTDY191LMKILTERGY
201-250201SFVTTAEREI211VRDIKEKLCY221VALDFENEMA231TAASSSSLEK241SYELPDGQVI
251-300251TIGNERFRCP261ETLFQPSFIG271MESAGIHETT281YNSIMKCDID291IRKDLYANNV
301-350301LSGGTTMYPG311IADRMQKEIT321ALAPSTMKIK331IIAPPERKYS341VWIGGSILAS
351-377351LSTFQQMWIS361KQEYDEAGPS371IVHRKCF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 2 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.02
|
|
| 12 | ATPase, nucleotide binding domain Actin family | - | - |
Deep-Palm: 0.11
|
|
| 19 | ATPase, nucleotide binding domain Actin family | - | - |
Deep-Palm: 0.94
|
|
| 219 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.91
|
|
| 259 | - | - | - |
Deep-Palm: 0.65
|
|
| 287 | - | - | - |
Deep-Palm: 0.33
|
|
| 376 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
2
LNCaP
Specificity: 0.286
2/2 (100.0%)
2
HAP1 cell
Specificity: 0.286
2/2 (100.0%)
1
Jurkat T cell
Specificity: 0.143
1/1 (100.0%)
1
cerebral cortex
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP cells (Mass)
Specificity: 0.143
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 39 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 149 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 267 | S → C | 0.003460 | SNP | Missense Mutation | CESC |
| 355 | Q → _Q356insC*R | 0.002506 | INS | Nonsense Mutation | COAD |
| 259* | C → ? | 0.002506 | SNP | Nonsense Mutation | COAD |