Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62746 | Rhob | Rho-related GTP-binding protein RhoB | Mus musculus (Mouse) | 196 aa |
Protein Details: P62746 (Rhob)
Protein Information
| Accession | P62746 |
|---|---|
| Protein Names | Rho-related GTP-binding protein RhoB |
| Gene Symbol | Rhob |
| Organism | Mus musculus (Mouse) |
| Length | 196 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 31311849 31772009 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAIRKKLVV11VGDGACGKTC21LLIVFSKDEF31PEVYVPTVFE41NYVADIEVDG
51-10051KQVELALWDT61AGQEDYDRLR71PLSYPDTDVI81LMCFSVDSPD91SLENIPEKWV
101-150101PEVKHFCPNV111PIILVANKKD121LRSDEHVRTE131LARMKQEPVR141TDDGRAMAVR
151-196151IQAYDYLECS161AKTKEGVREV171FETATRAALQ181KRYGSQNGCI191NCCKVL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | SWISSPALM DBPTM CYSMODDB | Ras family P-loop containing nucleoside triphosphate hydrolase Transforming protein P21 ras signature Small GTPase Small GTPase Rho |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.87
Deep-Palm: 0.98
|
| 20 | P-loop containing nucleoside triphosphate hydrolase Transforming protein P21 ras signature Small GTPase Small GTPase Rho | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.78
Deep-Palm: 0.98
|
|
| 83 | - | - |
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.87
|
|
| 107 | SWISSPALM DBPTM CYSMODDB | Ras family |
Brain
(31311849)
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
| 159 | Ras family |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.80
Deep-Palm: 0.96
|
|
| 189 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.03
|
| 192 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
| 193 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
| - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.417
5
Brain
Specificity: 0.106
5/5 (100.0%)
4
Liver
Specificity: 0.085
4/4 (100.0%)
2
Testis
Specificity: 0.043
2/2 (100.0%)
1
NSC
Specificity: 0.021
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.943
33
Brain tissue (Mass)
Specificity: 0.702
33/56 (58.9%)
2
Liver tissue (Mass)
Specificity: 0.043
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.