Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| P62754 | Rps6 | Small ribosomal subunit protein eS6 … | Mus musculus (Mouse) | 249 aa |
Protein Details: P62754 (Rps6)
Protein Information
| Accession | P62754 |
|---|---|
| Protein Names | Small ribosomal subunit protein eS6 (40S ribosomal protein S6) (Phosphoprotein NP33) |
| Gene Symbol | Rps6 |
| Organism | Mus musculus (Mouse) |
| Length | 249 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKLNISFPAT11GCQKLIEVDD21ERKLRTFYEK31RMATEVAADA41LGEEWKGYVV
51-10051RISGGNDKQG61FPMKQGVLTH71GRVRLLLSKG81HSCYRPRRTG91ERKRKSVRGC
101-150101IVDANLSVLN111LVIVKKGEKD121IPGLTDTTVP131RRLGPKRASR141IRKLFNLSKE
151-200151DDVRQYVVRK161PLNKEGKKPR171TKAPKIQRLV181TPRVLQHKRR191RIALKKQRTK
201-249201KNKEEAAEYA211KLLAKRMKEA221KEKRQEQIAK231RRRLSSLRAS241TSKSESSQK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein S6e Small ribosomal subunit protein eS6 |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.89
Deep-Palm: 0.16
|
| 83 | Ribosomal protein S6e |
Brain
(31311849)
|
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.97
|
|
| 100 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.231
6/6 (100.0%)
3
Brain
Specificity: 0.115
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.654
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.